K26135

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K26135

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K26135

Determination of introduced cDNA(s)

  • J013126K03 - Rice Full-length cDNAs - Original: J013126K03

    full reading [+] show sequence

    Nucleotide sequence: J013126K03 - full reading 
    GGTGCTGCAG CGGGGCGCTT GTGTCGCGCG TAGGTAGCGT ACTCCCTGTC 
    CTGGGCTGTC GGTGCGCCGT GCGCCCGCGG CCGCGAGTAC GACGCGCGCT 
    GCGTGTGCGC CGTGCGCGGC TCACGGGAAA CCAAGCCGTT TTTAATACGC 
    GGCGCCGGTC AAGCCACACC GCCGGCATGT GACAGTGCGC GGAGCGGCAT 
    ACGTACGCAG CAACGTCACT CGCGGCTCGG CTCGGGGAGC GCGTGAGCCC 
    GCGCAAGGCG AGGCAGCTCA AGCAGAAGCA CCGGAGGAGC TACTTCTACC 
    TCCTCTCCTC CGACCCGTCG CCCAAGTACC GGATGGGGCA GTCCTGCCGC 
    AAGAACAAGC GCAAGGAGCT CAGCAATGGC AAGTCGACGG CGCCGGAAGA 
    GCAGCGCGGC GACGTCGAGG AGATCGCCTG GAGTCAGAAG GGGCAGCAAG 
    ATGGATCGGA TTGCACCGAC GACGGCCAGG CGGACATGGA CGGCGAGGTT 
    GCTGGTGGTC AGTATGTGAT CAGGTACGAG AAGGACGGCG AGATGGAAAG 
    GGTGCTCGAG AGGCAGGCCG AGCTGATCGG CCAGTATGAG GCGGAGGAAG 
    AAGCTCAGAG GCAGTGGGAG AAGCAGTTCA ACGAGAATCG GAGCTCAGCC 
    AAGGTTCATG TTGAGGCAGA GAATAAGGCG TGCCAGATAG AAAATGGTTG 
    GGAGCAGAGC AAGGAGCATT CTAGGCTCGC GGATCAAGCG GTTCATTGCA 
    ACGAAGAGGC AAAACCAGGC GTTAAAAATC ACCCCAGCGC CAGCAACAAC 
    CGCTCTGCTG GACTTCTGTT GAATGGTTCC CTTCCTGAAT CACCCCAAGA 
    CACATCAGGA CAAGAAGCAG CAGCCGACCA ACGTGACTCG CACGAGGAGC 
    TTCACGGCCA CTGTCATGCA CAGTCTCAAG GAAACTCTAA TGTCGCCGGC 
    ACAATGACAG GGAAGAATCA AGAACAAGGA AACGAGAATC CGGATGGATG 
    TTCAAGCTAC TGTGACATCA AAGCGCCATC AGATGGGAGC CCGTCAATGA 
    GTGATGCCAC CCTGAACAGC AAGGTCTCTG ATTGGAGCTC ATCACGCTTC 
    CATGACCATG GCGACAACCA GGTCGATGCA GGGCCAGATC AACAGCCAAC 
    GAGCAACATG GACATAGAGT GTGTTCTTCA GGCACTTCAG CTTGCCAGGA 
    TTTCCCTGAG TCAGAAGCTG AGCAAGCCAG TTCCACCCAG CCAGGTGACG 
    CTGGCGCTTC CTGCACCAGG GGACCATGAA CATTCAGAAG ACGACGGCTA 
    CTCCCCCGTC GACGACGAGT TCAATTCTGC AAGAGATGAG CTCTGCAGCT 
    CAAGCCAATC TCCTGATCAG GAGATACTGG CTCTCCCTGC ACCAGAGGAT 
    TACCATGACA GGGAGAATTT GCCTGCCAAT GACGACGCTA CCATTTCACT 
    GACAGAGGAA CAGACCAGTT CAAGCCCACA CCGGCAGGAG ATCCTGGCTC 
    TCCCGGCTCC GGTAGATGAT TACCACAGAG AGATAGTGGA TGACATCAAG 
    ATACCTATCT GCATTGCCGG CTTGTTTCGG TTGCCAACAG ACTCATTTCC 
    AAAGGACGAG ATGGTCTCAA CTTGCAACAA ATATGGAGGT TCAGAGCTCA 
    ATCTGAGACC AACTGCAGCT GCTCCTCAGA ACGCCTTCGT GAGCAACACT 
    GCTGATCGTG TCACGGTAGC TCCGTCAGAG ATAAGAGATG ATCATGGCTT 
    TTCAACGAGG CCATGTTACG ATCCACACAG TTCTGGGCTG CTGTCTGTGC 
    CTACTTCTGG TAGGTGTAGC ACTCCAAGTT CAGATTTTAC AATAAGGGGA 
    GCTTCTTTCC TCTCCGGAAT TCCCGGACTT GCTGAAGATT TCAGGAAGGG 
    AAGGCCCCTT GCAGATGCAG ACCTGTTCAT GCAGCGTGGC TGCGATTACA 
    CTATTTCTAA TAAGTGGATG CTGTAGCTTG TAACATGCAT GAATTTGTTC 
    TCTTTGCTTT TTTTACTAGC GGAAGGCAGC ACTGATAATT GACAAGTAGT 
    ATTTCTCATG GCTGCATATC CTTGTGAAGA AGGCGTTCGA TTACTAGGGG 
    AGATAATTTG ACCAAGACAT GGGAAGTGCG CCACTTTTTG

    Gene models with high sequence identity

    1. AT3G52240.1 [+] show detail - unknown protein; Has 220 Blast hits to 193 proteins in 66 species: Archae - 0; Bacteria - 15; Met...
      E-value: 1e-13; Score: 75.50

     

    InterPro Scan Digest

    See the detailed result >

    AT3G52240.1

    Model type
    Protein coding
    Computational Description
    unknown protein; Has 220 Blast hits to 193 proteins in 66 species: Archae - 0; Bacteria - 15; Metazoa - 53; Fungi - 33; Plants - 66; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR