K28504

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K28504

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K28504

Determination of introduced cDNA(s)

  • J013088D22 - Rice Full-length cDNAs - Original: J013088D22

    full reading [+] show sequence

    Nucleotide sequence: J013088D22 - full reading 
    GGGCGGTGGC TCGGCTGGTT CCTCCCCGCT CCGCCTCTCC TCCTCCTCCT 
    CGCGCGGCGG CCGGCGAGCT TGGCCGCTCC GGCACGCACG GTTCGGGCAG 
    CCTCCACTCC TTCCCGACTC CCGCCCTTCC TCCCGCGCGC GCGCGCGCGC 
    GCCGCGGGCC GGTGTGAACA GGTTTTGGGA GGGGGGCGGC GCGGCGCGGC 
    CGGCCTCGCT CGTTCCGCCG CCGCCGTTGG CGGTTCGGCA CCGGAGGACT 
    GAAGGGAGTA TGAGGAGGTG AGCATTGTAG CTGGAGTGAT TCGGTTGCCG 
    GAAATGGTGC TGGTGGTGAA GCAGCACCGG TGCATGCACT CGGCGAGCTG 
    CGTTTGCATC AAGGGACACC TCAGCGAGGA CGCGCTGTTC CTGGTCTTTC 
    GTCACATGAA CTGGAACCCC AGGCTGATCG CCGTGCTCTC GTGCGTGTGC 
    GAGTGGTTCG ACGAGGTCGC GAAGCAGGTG CTCTGGAAGG AGTTCTGCCA 
    CGCCAGGGCG CCGAAGATGA TGCTGGATTT GCATTCGGGT GGCAGTCACA 
    TTGTCGACGG GAACTGGAAG GCGCTCGGGA AGCTTCTCAT CTACTGCAAT 
    GGCTGCACAA AAGGGGGCCT CTTTAACAAC ATTCATGTCC CTGGGCACTT 
    TGTGTTCAGG ACACGCTTTT CGAGGACCGC GGGCAAGAGT TTCCTGCCCC 
    AGCAGTGTAG GAATGATGTC TTATATGTCT CAGATCCATG CGAGCATCTT 
    GATCAAGGGG ATGAAGGTGA CTTGGGTTTC TTCCGTGGTA TCTTCATGTC 
    GTTCGCCACC TCAAAGGTTA AGAAGATGTT GATTGAGAAG CGGGCAAGGT 
    TCCATCCAAG CGAGTCATGT CCCTACTGTA AGGCTAAGCT GTGGAGCATG 
    TTGGAAGCAA ATATGTCGCC GGGGAGTTCT TCTGCCAGGC TTGGTGCTTA 
    CGAGGATTCT GTGGAGTATT TTGTATGCCT GAACGGACAT GTCATTGGAA 
    TTGGTACCCT TCTACCTCTG TCTGATTCTG AGGAAGTACC AGAGGAGTAG 
    TAATCAGGAA CTTGAATCAG GTTTGCAAGA CTGAAACCCT GGATTCGTGC 
    ATGCTGTTCG TTGCTGAATC TTTGGTTGCG ACTAACAGTG GGAGAATGCA 
    TGCGCAAGGC GACCTGCAGG TCTGCAGGAT GACAAGAATG GCTTTGCATC 
    GCAGTGTTGT TCTTCCTGAA ACTTTGCATC AGATGGGGAA AAAAAGCTAT 
    TTTTATACTG TTCTCTCCTT TATCATTGAT GCCTCATCCC TGCTTCCCCT 
    AATTGTAACC GAGACACCAA TCTCCTGTCA TGTCCTATAT GTTCACAGCA 
    CGTAATGTGG TGTTTATTTA GCTTAATTGG ACTGTCAAAA ATATAAAACT 
    GGTGCTCATC ACATGC

    Gene models with high sequence identity

    1. AT5G39360.1 [+] show detail - EID1-like 2
      E-value: 1e-104; Score: 377.00

     

    InterPro Scan Digest

    See the detailed result >

    AT5G39360.1

    Model type
    Protein coding
    Short Description
    EID1-like 2
    Computational Description
    EID1-like 2 (EDL2); BEST Arabidopsis thaliana protein match is: EID1-like 1 (TAIR:AT5G15440.1); Has 126 Blast hits to 118 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 126; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR