K28703

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K28703

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K28703

Determination of introduced cDNA(s)

J023008H01 - Rice Full-length cDNAs - Original: J023008H01

full reading [+] show sequence

GAGCGCACGC ACACACGAAC GGCCGAGCAC GCGGCCGCCG GCGCCGGCGC 
ATCGGCGGCG GCGTACGTGC GAGGAAGAAG GCCGGCCACC ATACCGATCA 
CCATTGTAGC GCCGCAGGAG GTGATAATCT GGGTCGTCGT CGTCGTCACT 
GCCGACGTAC GGCGCCTAGC ACCGGCTGCT GGGCGAGCGA GCTCGACCGC 
GTTCGCGTGA ATTAATGGCG GGGTGCCTGT GGCCGTGCGT GACCGGCGGC 
GGCGCGGCGG CGGACGGGGC GGGGAGCCTG TTCCGGTCGA AGGCGAGGGG 
CCCCGTGGAG GTGGTGCGGC ACGCGCGGGA GCTCCTCGCC TTCCTCGCCG 
AGAACCACGA CGCGTGCGGT GACAAGCGCG ACGTCAAACG CGAACACAAG 
ATGGTAGATC TAGCCAAAAG CATCGGGGAG ATGAAATCCA TCCTTTATGG 
AAATGGCGAG GCAGACCCAG TCGATGAAGC TTGCTCGCAG TTGACGAAGG 
AGTTCTTCAA GGAGAATACC AATAGTCTTC ATCTACTAGT TGTTTGCCTT 
CCATACATGG ACCTGGAAAC TCAGAAGGAT GTCACTCAAG TTACTGCGAA 
TTTGCTAAGG CAAAAGGTAG ATTATAGGAT GGTTGCCTCT GATTATTTGG 
AAGAAAACCA GGATCTTTTG GATGTTCTAA TGTCTGGGTA TGACAACATG 
GACATTGCAA TACATTATAG TGCAATTCTA AGGGACTGCA TACGGCACCA 
AGTCGCTGCA AGGTATGTAT TAGAGTCTCA GCATATGAAG AAATTTTTTG 
ATTATATACA ATATCCAGAC TTCAACATAG CATCTGATGC CTTCAAGACC 
TTTAAGGAAC TCCTCACAAG GCATAGATCA AGTGCTGCTG AGTTCTTTTC 
AAATAATTAC GATTGGTTTT TTCCGGAATT TAACTCAAAA TTGCTGTCAT 
CATCCAACTA TATCATTCGA AGGCAAGCCA CTCAGCTACT AGGAGACATT 
CTTCTGGATA AGTCAAACAC AACAGCAATG GTGCGCTATG TTAGCTCAAA 
GGATAACCTC ATAATACTAA TGAACCTTTT AAGGGAGCAA AGCAGGGCCA 
TTCAAGTTGA GGCTTTTCGC GTTTTCAAGC TGTTCACTTG CAATCCGAAG 
AAGCCACCTG AGATCGTGGG TATACTGGTG ACAAACAAGA GCAAAATCCT 
CAGGTTCTTG GCAGATTTCA CAATAGAAAA AGAGGATCAG CAGTTCGAGG 
CCGACAAAGC CCAGGTTGTC ACCGAGATAT CGGCCATGTG ATCAAACAAC 
CGGAGAAAGC GTTGATATCC ACAGAGAGTG GAGTTCCTCT TGTTTTCGTT 
TTCTTCATCA TAATCTAACC AAATGGAAAG GAAATCAAGC TGATTCTACT 
GCTACGATGC TTGTGGTTTG GGCCACTTGT CCATTGAACT TGTAACTGGG 
CCGTTTGCTT GATAGCCTCT ACTACTACTA ATGTGTGCGC CCTTCCTCTC 
AAAAAGGAAA AAAAAAGAGA ATTTTGCC

Gene models with high sequence identity

AT5G47540.1 [+] show detail - Mo25 family protein
E-value: 1e-119; Score: 427.00

InterPro Scan Digest

Program	Description	E-value
HMMPanther	MO25	4.9e-101
HMMPanther	MO25-RELATED	4.9e-101
HMMPfam	Mo25-like	6.8e-102
superfamily	Armadillo-type fold	5.7e-90

See the detailed result >

AT5G47540.1

Model type: Protein coding
Short Description: Mo25 family protein
Computational Description: Mo25 family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mo25-like (InterPro:IPR013878), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Mo25 family protein (TAIR:AT4G17270.1); Has 570 Blast hits to 568 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 216; Fungi - 142; Plants - 154; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink).
Link: InterPro Scan - TAIR