K28815

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K28815

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K28815

Determination of introduced cDNA(s)

J033070J12 - Rice Full-length cDNAs - Original: J033070J12

full reading [+] show sequence

GGTTCCTCAG TTCGGTACTT CTTCTTCCTT CACTCTCCCC ACCAAATTCC 
CCCAAATCGC AGCTGTTCGC CACCCGCATT GCGCCGCCAT TGCCTCCAAA 
TCCGAGTACT CCTTGAGTAA TCTCAGATCC ATCTCGGGTT CCTCCCGCCG 
TTGGCAGCAG CCGGAGCTTT TTTCCGCGGA AGAAATGGCG CCGTTTCGGT 
GAGTTCTTGG CAGTTTGGGA TGATGCTTGG TGGGTAGGAG GACTAGGAGT 
GCGGCGGCTC GGGGAGAGGC TGCGATGGAG AGCGCCGCCG GGGAGGAGGG 
GAAGGCTGCC CCGTCGCTTC CCCTGGCGAC CCTGATCGGC CGCGAGCTCC 
GCGGCGGCGG CTCCGAGCGG CCGCTCGTCC GGTACGGCCA CTTCGGCTTC 
GCCAAGCGCG GCGAGGACTA CTTCCTCGTC AAGCCCGACT GCCTCCGCGT 
CCCGGGCGAC CCTTCCTCCG CCTTCTCCGT CTTCGCCGTG TTCGACGGAC 
ACAATGGCGT GTCGGCGGCG GTGTTCAGCA AGGAGCACCT GCTGGAGCAC 
GTGATGAGCG CCGTGCCGCA GGGCATCGGC CGCGACGACT GGCTGCAGGC 
GCTGCCGCGC GCGCTGGTCG CGGGCTTCGT GAAGACGGAC ATCGACTTCC 
AACGCAAGGG GGAGGCATCA GGGACGACAG CGACGCTGGT CGTCGTCGAT 
GGGTTCACGG TCACGGTGGC GTCTGTTGGG GACTCCAGGT GCATATTGGA 
CACGCAGGGC GGTGTGATCT CGCTGCTAAC CGTGGACCAT CGTCTCGAGG 
AGAATGTAGA GGAGCGGGAG CGCGTCACCG CGAGTGGAGG GGAGGTCAGC 
CGGCTCAACC TGTGTGGTGG ACAGGAGGTG GGACCTCTCA GATGCTGGCC 
AGGTGGATTG TGCCTTTCAA GATCGATTGG GGATACTGAC GTTGGGGAGT 
TCATTGTGCC AATTCCACAT GTCAAGCAAG TGAAGCTATC AAATGCTGGA 
GGGAGGCTAA TAATTGCATC AGATGGAATT TGGGATGCAC TGTCCTCAGA 
AGCTGCTGCT CAGGCATGCC GAGGATTGCC TGCAGAGCTG GCTGCAAAGC 
TTGTCGTGAA GCAAGCACTG AAGACAAGTG GGCTGAAAGA TGACACCACC 
TGTGTGGTTG TTGATATCAT CCCATCTGAT CATTCTTCAA CACCTCCATC 
ACTATCTCCA AAGAAAAACC AGAACAAGTT GAGATCTCTT CTTTTTGGTA 
GGAGGTCACA TAGTTCTGTT GGAAAGCTTG GAAACAAGTC TGCTTCATTT 
GACTCTGTGG AGGAATTATT TGAAGAGGGT TCCGCAATGT TGGATGAAAG 
GTTGGGTAGG AATTTTCCAT CAAAAGCAAA CTCGTCCCCA TCTCGCTGTG 
CAATCTGCCA AGTGGATCAA GCACCTTTTG AAGATTTAGT GACAGATAAT 
GGAGGTGGTT GCTGTTCTGC CCCATCGACA CCATGGGTTG GCCCTTATCT 
TTGTTCAGAT TGTAGGAAAA AGAAGGATGC AATGGAAGGT AAAAGATCTA 
GTCGCTCAAC AGCGTGCAGG TGAAATTGCC AATAGGACTA ACTGGTCCTT 
GTTCGTGCAA ACTGGTCTCC TGGTTCGGTT GTCTGCCACA TGTAAAAAGA 
GGATAATAAT CTGTTTGCTG CTGGATCCAA GTATTATTGG TGAAACTAAC 
TGCAATCTAG CCTGAACTGA ACAAATTGGG CTACTAACAA TCTTGGGAGT 
CTATCAACAG CGCAGATGAA AATTTCTGTT TGCACTGGGA AGATAGCTCA 
CAGGATTTCA ACCCCGTAGT TTTTTTTTTT TTTGAACCTT AGTATGTAAA 
GTGAAATGTC TAGCTTAACA ATGTTTGTAA GAGATGGCAA TTGGCAAGGC 
TCCTTGTTCT ACCTTGGAAT GTATATGCTT GTGGAGCCGA ACAGACTAAT 
TTATTTATCT CATGCTATCC TAATCAATGG TAATGTCTTT CGGTGTTC

Gene models with high sequence identity

AT1G09160.2 [+] show detail - Protein phosphatase 2C family protein
E-value: 3e-162; Score: 569.00

InterPro Scan Digest

Program	Description	E-value
HMMPanther	PROTEIN PHOSPHATASE, PLANT	2.6e-176
HMMPanther	Protein phosphatase 2C	2.6e-176
Gene3D	Protein phosphatase 2C-related	9.8e-49
HMMSmart	Protein phosphatase 2C-related	3.2e-59
HMMSmart	Protein phosphatase 2C-related	0.0011
HMMPfam	Protein phosphatase 2C, N-terminal	2.1e-36
superfamily	Protein phosphatase 2C-related	1.7e-51

See the detailed result >

AT1G09160.2

Model type: Protein coding
Short Description: Protein phosphatase 2C family protein
Computational Description: Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G68410.2); Has 5570 Blast hits to 5569 proteins in 486 species: Archae - 4; Bacteria - 416; Metazoa - 1194; Fungi - 467; Plants - 2390; Viruses - 7; Other Eukaryotes - 1092 (source: NCBI BLink).
Link: InterPro Scan - TAIR