K29450

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K29450

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K29450

Determination of introduced cDNA(s)

  • J013153F04 - Rice Full-length cDNAs - Original: J013153F04

    full reading [+] show sequence

    Nucleotide sequence: J013153F04 - full reading 
    GGGCGGCTCT GCCTCTGCAG CAGCAACCAC ATCTCCGGCG GCGGCGGCGA 
    CTCCGGCGAT CCCCCGTCGG CTTCCTCTCT CCGTAGTCTC TCCGGCGGCG 
    TCGGCAGGAG CTCCCCCCCT CCCCCCATCA CATGGGGGCT TCCGAGTCTA 
    TCCTCTCCAG GCCGCAGCAG CAGCGGCGGC CGCCGTGGGC GGACGAGATC 
    ACGACGGTGT CCGAGGGCCG GCGCGACGCC GGGGACGGAG ACCCCCTCCT 
    CCACCGCATC AAGTCCCTCA CCATCGCCCC GCCGCTGTTG AGCGGCCAGT 
    CGGCGGCGAG CTCGGAGGCG GAGAGCAGCC TCACCGACAT CCTCGTCCGG 
    AAGCCATCCT CCTCCTCCGC CACCTCTGGC AACTTGAATC CAAATGTGAT 
    GTTCGAGCTT TTCTCTCTGT ACCGTGAATG GCAAGAAGAG AAGGCCAAGA 
    AAATTAGTGA AACACAGGAA GAGATAGAAA ACAAGATAGA AACAGCAGAT 
    GCTTTGTCCA TTAAGCTTCT CCAGCGGTTC AATTATTCTG TTACTTCCAT 
    GAGATCAACC TCTCACAACC TTGCTGAAGT CCGTCCACTG CAGGTGGAAG 
    TTGGTGAGTT GAAGGGCAGG TTAACCGAAG TAATAAGTAA CTGTGATGCA 
    TTGTGCAAGA GAATTGCCGC TGAAGGTCCA GAAAGTCTGC GATCGTCTGT 
    TCAACCTTTC ACCACTAGTA AAATGGAGCC AAGAGAGAGC GAAACACTTG 
    ATCTGAAAAC ACAGTCCTGA ATTGCACACA ATCTGTCTGA TACTCTGATT 
    GGTACGCCAT CAAAGGCATC AGAAGGAACT ACACTGACAT TTCCTAATTC 
    CAAAGGGTAG CTGCACCATG CCCCCTGTGT AGTGTGTACC CTCTCTGTAC 
    ATCCATACTA TGGCAGTATG GTTAGACGTC AGATCTTCTC AGCTCTTATT 
    GCAACATTCG TCCATCTTTT GTAAAGCTAA ACTGTTCATG TACACAGATC 
    TGTACAACCA AATATTAACA TCAGAAGTGC ATGATTTAGG TTCAGTTGCT 
    TGTCTTCACT GCATATATAC AGTAACAAGA GCGTGTGTCT GTCTGATT

    Gene models with high sequence identity

    1. AT5G66290.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myrist...
      E-value: 5e-50; Score: 195.00

     

    InterPro Scan Digest

    See the detailed result >

    AT5G66290.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR