K29618

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K29618

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K29618

Determination of introduced cDNA(s)

  • J013091D22 - Rice Full-length cDNAs - Original: J013091D22

    full reading [+] show sequence

    Nucleotide sequence: J013091D22 - full reading 
    GGGAGTGAGA GAGCTCGCGC GCGCGCGCGT GCGTTCGCCT ACTACATTCT 
    TTCCCCTCCA ACCTTTTCGA GGAGGAGGAG GAGGCGGTGG CGATTGATGG 
    AATCTGATCG AATGCCGCTT CAGGCTGGGT CAATCGAGCT GGCTGCAACG 
    ATCGGAGGTT TCCTATCCCC TCGTGAAGGT GTCAAATCAG TATCCTTGTG 
    CCGGATGGTT TGGGGATAAT TTTCGTAGTG AGTTCATAAT AGCGTCTCAT 
    TTGGGATTCC TCTGGTTGAT TCAGTTCCCT TTGCAAGTTT GCGGGTTTGT 
    TCACGGATTT GGTTGGCTTG AGATCGATCT TCATTCATTG GGAGATGGAT 
    GATGATGACT ACTCCTGGGT GCGGCGCACC AAGTTCTCGC ACTCCATTGT 
    TAAATCCAAC TCTGGCAGGG AGCAGTTTGG TGCATTCCTT GATCCGTTTG 
    ACAGTTCCAC TGCATGGAGG CAGAAAGGAT TCAGTGGAGA GCTCATGATT 
    CATGGACATA ATTTACAGCC GAGGGCAAAA GGAGCAGTCT CAAAGTCACC 
    TAGGCCTTCA ATCCCGTTGG CGAAATCACC AGTTTCACAG GCAGAGCGGA 
    AGCTGAAAGC TAAGTTTTCA GATGGTGAAT TGAAACAACG GGGGAAAATT 
    AGTGATGGCT CGTTGCGAGA AGCATCGAAA GAGAAGGATC GCAAGGTTGG 
    GCATAAAGGA GAAGGCCTTA GCCTGGATAT TTCTTGTCCA ATTCTGGATC 
    GGACAGTTCA GGATGACAGT TCAGACACGC TTGACTTCTC TTTCCACTCA 
    GAAGAGCAAA GTTTAAGGTT GCTGAGAGTA TGCTCGAGTC CAGCTCCTTT 
    CTATTCGAAG GATACAACTA CGTTTGGTGA TTCCAAAATA CATAGTACGT 
    CTGTTAAGAT TGTTGGAGAG GGATCGAAGC CGAGGAGGAG AGCGAAATCC 
    CCAATGCCGA CCCGTGTCAT CTCTGAAGTT TTTAAGGAGG CCAAAGCTGC 
    CACTAAGAGG TTCTCTAGCC CACAGCGGCA AAGGAAATCT AGTTCTCCAC 
    ATTCACCACG TTCACCCGAT GATAGTCCCC GGTTTGGCTT TCCTTCAATG 
    AGAACACCGG GTAACTTGAA AGCTAGGAGG GCCTCGTCCT GGCCAAGGAA 
    CTGTGACAAT GGAGTGGCCA AGGCTGTTGC ATTGGATATA CTTGAGAGAT 
    GGACAATTGA CCGCTCACAG TTACTCATTG GTCAAAGATT TGCATCAGGG 
    GCATATAGTC GTTTGTTCCA TGGAATTTAC AAGGAGCAGC CAGTTGCTGT 
    CAAATTTATC AGGCAGCCTG ATGAAGAAGA AGATGCAGAA TTGGCTGCTA 
    AACTTGAGAA GCAATTCACT GCTGAAGTAA CCATTCTGGC TCGGCTCCAT 
    CATCGCAATG TCATTAAGCT GATTGGGGCA TGTAATGCTC CACCGGTCTT 
    TTGTGTCATC ACTGAGTTCC TGTGCGGGGG GTCTTTGAGA GCTTTTTTGC 
    GCAAGCTCCA GCGCCAAAAG CTTCCTTTGG AGAAGATCAT TTGCATTGCT 
    TTGGATATTG CACATGGTTT GGAGTACATT CACTCGCAAA GAGTAATCCA 
    TCGTGATGCG AAACCTGAGA ACATCTTGTT TGATGGAGAA TGTTGTGCAA 
    AGGTTGTTGA TTTTGGAGTG GCTTGTGAAG AAGTATACTG CAACTCATTG 
    GAAGATGACC CAGGTACTTA CAGATGGATG GCACCAGAGA TGTATAAGCG 
    CAAACCATAT GGTCGGAAGG TTGACGTCTA CAGTTTTGGC CTCGTTTTGT 
    GGGAATTGTT TAGTGGCTCG ATCCCTTATG AAGAGATGAC TCCATTGCAG 
    GCAGCTTTTG CAGTTGTTAA TAAGAACTTA AGACCAGTTG TTCCTTCAAG 
    CTGTCCGGCG CAACTTCGAC TTTTGATCGA GCAATGTTGG TCTTGTCAAC 
    CAGAGAAGAG ACCTGAGTTT TCCCAAGTAG TTCAGATCCT CAAAAATCTC 
    AAGGAGGCCC TGGATAGAGA TGGAACGCTT GACAAGATCC CAAGCACCAA 
    CTGCCAGGAA CCTCCTGATC AGAACAAGAA GAGACTGTCC AATTGGATCC 
    AAAGACTCTC GTACAGTCAG GCCGATTTCT CCGGACCTCC ACCGCCAAAG 
    TTATTGTAAT TATATGCATT CCTCTCTTCC ATAAATATCG TAGCATCTGC 
    TAGATGTCTC TGTAAATCAT AAGGTTCTTC TTGGTGTATA AACTCCGCAC 
    ATTTTTTTAG TGGACAGTTC ATTCTTGTTT GGCTTAGTAA TTTTGCCTGC 
    AACCAACCAA TGGAGTCTTA GTTCCCGGCG GGTGGGGACG

    Gene models with high sequence identity

    1. AT5G58950.1 [+] show detail - Protein kinase superfamily protein
      E-value: 5e-104; Score: 375.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMSmart Serine/threonine-protein kinase domain 4.5e-55
    HMMSmart Tyrosine-protein kinase, catalytic domain 1.7e-60
    ProfileScan Protein kinase, catalytic domain 40.259
    Gene3D no description 2.1e-14
    Gene3D no description 7.5e-54
    superfamily Protein kinase-like domain 1.7e-75
    FPrintScan TYRKINASE 2.4e-17
    FPrintScan TYRKINASE 2.4e-17
    FPrintScan TYRKINASE 2.4e-17
    FPrintScan TYRKINASE 2.4e-17
    FPrintScan TYRKINASE 2.4e-17
    HMMPanther PROTEIN-TYROSINE KINASE 7.9e-158
    HMMPanther SERINE-THREONINE PROTEIN KINASE 7.9e-158
    HMMPfam Serine-threonine/tyrosine-protein kinase 4.2e-60

    See the detailed result >

    AT5G58950.1

    Model type
    Protein coding
    Short Description
    Protein kinase superfamily protein
    Computational Description
    Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G46930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR