K29712

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K29712

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • decreased size (PATO:0000587)
    (Seed::Shape::small)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K29712

Determination of introduced cDNA(s)

  • J033148L04 - Rice Full-length cDNAs - Original: J033148L04

    full reading [+] show sequence

    Nucleotide sequence: J033148L04 - full reading 
    GGCAGCGGCG CCTCTCCACC GGGAACCGCT CACCGGCCGC CACACACGAG 
    TGCAGGATGC TCCCCCTCGC CGCCGGCGCC GGCGCCGCGA GACCCTGCCT 
    CTCCTCCTCA CCGGCGCCGC CGGTATCCTC GCCCGGGGCG ATTCCTCTCC 
    TTCGCCACAC TCCTATCCCT CACCACCGCA GGCGCCCCCT CGCGGCGCTC 
    CGAACCCGCA TCATGCTCCT CCGGCCTCTC AGAGCCGCCG CCTCGCCGGG 
    GCCGGCGGCG TCCTCGCGCC CGGCAAGGGA CCGCGTGATT GACTTCGGGA 
    AGCACAAGGG GCAGATGCTG GGCACGCTCC CGCCGTCCTA CCTGCGGTGG 
    GTCGTCGCCG AGCTCGACTA CGGGGACACC GCGGCATGGG CGAGCCTCGC 
    GCGGGAGGTG CTCGACGACC CGGTCTACGT CGACCGCGTC GAGTGGGAGC 
    ACGCGCACCG CTTCCTCCGC GGGGACACCG ACTACGACGG CGACGGCGAG 
    GATGGGCCGC TCCATGAGAT GGCCGACCGC TTCGGCTGGG ACCTCTCCGA 
    CGAGGAGGGG TGGAGCCGCC TCGACTTCCG CCTCCTCGGC ACCTCCTACG 
    GTGGCCGCAT CCCGCGAAAG GGCGGCCGGA GGCAAACCAC CACCAGCTCC 
    CTGTTCGACA TCGGGGCTGA AACGGACGGC CCGCGAGGGA AGCGGGACGA 
    GAGGAGGGAG CGGATGCGGC TGAGGAGGGA GACGCAGGTG AGGGGTGCCA 
    AGTTGGATAT GCTCGGGGTG AACGCCGGCG TCAAGGACGG CGGTGTTCTA 
    GGGACGCCGA GGAAGGCCCG TACTAGGACG ACGGCCAAGA CGGACATTTT 
    GGGATTGGGT CGGCGCAGGA GCCGCGGCGG TGAGGTGCTC GGCGAGAAGG 
    TGTTGCCTGG TTCCGGCGGT CAGGGAGGGA ACCCGTTCCC CGGCCGGCAA 
    GCATTCCTCG ACAAGGTCAG GAAGCTGAAA GATGATAGCT AGTTTGGCGA 
    CTTCAGGAGA TCAGAACAAT AGGGTGAATT GTACATGTAA ATCTTGATTT 
    TGGCTGAGGA TTATTAGTTT ACGATTGACT GAACGATTTG TGAGAGGTTG 
    GTTATGCTGA ATTTGTGCAG TTGGTTGCGA GTTTGCAATT GTGTATCATT 
    GCGCCCTGTA ATTGTGATTC ACATTTCTT

    Gene models with high sequence identity

    1. AT1G51080.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 4e-27; Score: 119.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G51080.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 11 growth stages; Has 101 Blast hits to 98 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 10; Plants - 27; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR