K29750

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K29750

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K29750

Determination of introduced cDNA(s)

J013091L23 - Rice Full-length cDNAs - Original: J013091L23

full reading [+] show sequence

GCCTCTCACG TCTCACCCAC ACCTACCCAA TCTCCCGGTG CGCAGCGGCG 
AGCGACATGG AGCTCCGCGA GCTCGGCGCC ACGGGCCTCC GCGTCAGCCC 
CGTCGGCTTC GGCGCCTCCC CTCTCGGCCA TGTCTTCGGC GACGTCCCCC 
GCGACGTCGC CCGCGCCGCC GTCCGCCGCG CCCTCGACCT CGGCATCAAC 
TTCTTCGACA CCTCCCCGTA CTACGGCGGC ACGGTGTCGG AGTCGGTGCT 
CGGGGACTGC CTCCGCGCCG CGGGCGTGCC GCGGGACCGG TTCGTGGTCG 
CCACCAAGTG CGGGCGCTAC AGGGAAGGGT TCGACTTCAG CGCCGCCCGC 
GTCACCCGCA GCGTCGACGA GAGCCTCGCA CGCCTCGGCC TCGACTACGT 
CGACATCCTC CACTGCCACG ACATCGAGTT CACCGACCTC GACCAGATTG 
TGAATGAGAC GATTCCGGTG CTCCAGAAGA TCAAGGAGAG CGGGAAGGCG 
CGGTTCATCG GGATAACCGG GCTGCCATTG AGCATCTACA CTTATGTGCT 
CGACCAGGTG CCGCCAGGTT CTGTGGATGT GATTCTGTCT TACTGCCACT 
ATGGGATCAA TGATACCGCG CTTGTGGATT TGCTTCCCTA CCTGAAGAGC 
AAAGGTGTTG GCGTGATCAG TGCTTCACCT CTTGCAATGG GGCTTCTTAC 
AGATAACGGG CCACCCGAAT GGCACCCTGC ACCGAAAGAA CTAAAGTTGG 
CATGCAGGGC AGCAGCAGAT CACTGTAAGA AGAAAGGGAA AAACATTACA 
AAGCTAGCTA TGCAGTACAG CTTGATGAAC AATGAGATTT CCACGGTTCT 
TGTTGGAATG AACTCTCCAG AACAGGTAGA GGAGAATGTG GCTGCTGCAA 
TTGAATTGTC TACTTCCGGT ATTGATAAAG AACTTCTGCA CGAAGTTGAA 
GCAATTCTTG AGCCTGTCAA GAACATGACC TGGTCCAGTG GCATTGAGCA 
AGCCTGATAT CTGGCAGCAG CCTGGCTCAT TATAATTCAT TCATGTATTC 
ATTGAGTCAA TTGTTTGCAT TGCAATATTT CAATGGTGAG CAAAGGAAAG 
TCATCATCGG AAATTCGTTG GTATGTTGTC TGTATCAATT TAGAAGTCTG 
TGAATAGACA AACAGCCAAA CATGGATGCT GATAATAATG GAATAAGTTG 
TGCCCATGCA CCTTGCTGTA ATGAGGCTTG TATATTGCTT CAACTACAAA 
CTGTACCAAA AAACAAATTG CAAACCAATA ATTTGCCGAT GCAAAAGGAA 
ATACC

Gene models with high sequence identity

AT4G33670.1 [+] show detail - NAD(P)-linked oxidoreductase superfamily protein
E-value: 4e-129; Score: 458.00

InterPro Scan Digest

Program	Description	E-value
HMMPanther	ALDO-KETO REDUCTASE	2.5e-101
HMMPanther	Aldo/keto reductase	2.5e-101
superfamily	Aldo/keto reductase	6.4e-72
Gene3D	Aldo/keto reductase	2.7e-67
HMMPfam	Aldo/keto reductase	1.1e-63

See the detailed result >

AT4G33670.1

Model type: Protein coding
Short Description: NAD(P)-linked oxidoreductase superfamily protein
Curator Summary: Encodes a L-galactose dehydrogenase, involved in ascorbate biosynthesis
Computational Description: NAD(P)-linked oxidoreductase superfamily protein; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G60750.1); Has 28637 Blast hits to 28630 proteins in 2499 species: Archae - 653; Bacteria - 20546; Metazoa - 1049; Fungi - 1796; Plants - 827; Viruses - 0; Other Eukaryotes - 3766 (source: NCBI BLink).
Link: InterPro Scan - TAIR