K29801

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K29801

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K29801

Determination of introduced cDNA(s)

J033124L23 - Rice Full-length cDNAs - Original: J033124L23

full reading [+] show sequence

GACGAGCTGC AAAAATGGCG GCACCCGCCT CGCCACTCCA CCCTCTCGCC 
GCCATAGCAG CAGCTCTCCT CCTCCTCCTC GTCGCAGCCC CCTCTGCAGC 
AGCTGCAGCT AGCCCCGTCT TCCCCGGAGT CCCTCCCCTG CAGCTGCAAG 
CTCTGCAGCA GCGGCGGCCG GCGAGCTCCG CCGGCGGCAG CAGGTATGTC 
GTCGCCGCGG CGGCGGCGGC GGCCGGAGGG AACGGCACAG CGGCGGCGGC 
GAAGCCGTTC ACGGCGCACT ACTTCCCGCA GGAGCTGGAC CACTTCACCT 
TCACGCCCAA CGCGTCGGCC GTCTTCTACC AGAAGTACCT CGTCAACGAC 
ACCTTCTGGC GGCGGAGCGC CGCCGCCGGC GAGACGCCGG CCGGGCCGAT 
ATTCGTGTAC ACCGGCAACG AGGGCGACAT CGAGTGGTTC GCCACCAACA 
CCGGCTTCAT GTTCGACATC GCGCCCAGCT TCGGCGCCCT GCTCGTCTTC 
ATCGAGCATC GATTCTACGG GGAGTCGAAG CCGTTCGGCA ACGAGTCGAA 
CAGCTCGCCG GAGAAGCTGG GGTACCTGAC GTCGACGCAA GCGCTCGCCG 
ACTTCGCCGT CCTCATCACC AGCCTCAAGC ACAACCTCTC CGCCGTCTCC 
TCCCCCGTCG TCGTCTTCGG TGGCTCCTAC GGCGGCATGT TGGCTTCATG 
GTTCAGGCTA AAGTATCCCC ATGTCACCAT TGGCGCCGTC GCGTCCTCTG 
CTCCGATCCT GCAGTTCGAC TACATAACTC CATGGAGCAG CTTCTACGAG 
GCCGTCTCGC AAGATTACAA GTCTGAAAGC TTCAATTGCT TCAGTGTTAT 
CAAGGCAGCT TGGGATTTGA TAGATGAGAG GGGATCCACT GATGCAGGGC 
TCTTACAGCT CAGCAAAACC TTCAGAGCCT GCAAGACTGT GAAATCGGTT 
TACTCGTTCA GAAACTGGCT ATGGACAGCA TTTGTGTACA CAGCCATGGT 
GGACTATCCA ACCCCGGCCA ATTTCCTGAT GAATCTGCCT GCCTATCCTA 
TCAAGGAGAT GTGCAAGATC ATCCACGGCT TCCCTGCAGG AGCAGACATC 
GTTGACAAAG CTTTCGCAGC GGCGAGTCTG TACTACAATT ACACAGGAGA 
TCAAACATGC TTCCAGTTAG AGGATGGAGA AGACCCCCAT GGCCTCAGTG 
GTTGGGGATG GCAGGCCTGC ACAGAAATGG TCATGCCGAT GACGATATCG 
AACGAGAGCA TGTTCCCTCC ATTCACCTTC ACTTATGAGG GGAAATCTGA 
TGACTGTTTC CAGAGCTACG GTGTTCGTCC GAGACCACAC TGGATCACCA 
CTGAATATGG TGGAAATAGA ATTGACCTGG TGCTCAAGAG GTTTGGGAGC 
AACATCATCT TCTCCAACGG AATGCGAGAC CCATGGAGCC GTGGCGGGGT 
GCTCAAGAAC ATATCATCTA GTATCATTGC CCTTGTCACG GAGAAAGGAG 
CTCATCATTT GGACTTCAGA TCAGCAACTA AAGATGATCC AGATTGGGTT 
GTAGAACAAC GAAGACAAGA AGTTAAGATC ATACAGGGAT GGATAGATCA 
GTACAACGAG GACCTTGCAC AGATATCAAA ATGAGAAGAT GCAGTTACTG 
CGACAGACAA TCGAAACATG AGACTGTCTA CACAGTAATC AACTGTTTTT 
GGCTACATGG AAAAAATAAG GAAAAGGAAT TTTTCTTTCT TGCAGGCTGT 
TAGACAGAAA ATTAAATTAA GGTAACATAC AGTGGAAACT CAATAAGTCA 
CCC

Gene models with high sequence identity

AT2G24280.1 [+] show detail - alpha/beta-Hydrolases superfamily protein
E-value: 0; Score: 645.00

InterPro Scan Digest

Program	Description	E-value
HMMPanther	LYSOSOMAL PRO-X CARBOXYPEPTIDASE	1.2e-262
HMMPanther	Peptidase S28	1.2e-262
HMMPfam	Peptidase S28	3.5e-84
superfamily	alpha/beta-Hydrolases	1.6e-10

See the detailed result >

AT2G24280.1

Model type: Protein coding
Short Description: alpha/beta-Hydrolases superfamily protein
Computational Description: alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: serine-type peptidase activity, serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system, lysosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S28 (InterPro:IPR008758); BEST Arabidopsis thaliana protein match is: Serine carboxypeptidase S28 family protein (TAIR:AT5G65760.1); Has 1253 Blast hits to 1217 proteins in 170 species: Archae - 0; Bacteria - 7; Metazoa - 611; Fungi - 189; Plants - 249; Viruses - 0; Other Eukaryotes - 197 (source: NCBI BLink).
Link: InterPro Scan - TAIR