K30325

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	increased length (PATO:0000573) (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K30325

Determination of introduced cDNA(s)

J013007O07 - Rice Full-length cDNAs - Original: J013007O07

full reading [+] show sequence

GACTAGTAGC GTACACTACC ACAGCTAGCA ATGGAGACCT CGTGCTTCCT 
TACCTCCAAT GCCTCGCCGG TGAAGAGCAT GGTGATGCCG TCGCCGGCCG 
GCGTCGTGAA GGCCAGGCCG CACGTGCTCT TCGGCGGCCG GCGAGCGGCG 
AGCTCGTCGG TGACCACCTG CTGCAGCTAC AACGGCGAGG GCGCGGCGCC 
GGCGATCGAC CCGGACTGGC GGTCGTTCAG GGCGCAGCTC TACTTCAACG 
AGCAGTACGC GAAGAGCGTG AACCCGGCGG TGGCGGCGGT GAGGGCGACG 
GCGACGACGC CGGAGCCGGT GAAGATCGGC GACAAGTGGG CGCACCCGCT 
AGTGGAGCCG GAGAAGGGGT GCCTGCTGAT CGCGACGGAG AAGCTGGACG 
GGTCGCACAT CTTCGAGCGC ACGGTGGTCC TCCTCCTGTC CGCCGGCGTG 
CTGGGCCCCG TGGGCGTGAT CCTGAACCGG CCGTCGCTGA TGTCGATCAA 
GGAGGCGCAG GCGGTGTTCG CGGAGACGGA CATCGCGGGG GCGTTCTCGG 
GGCGGCCGCT CTTCTTCGGT GGCCCGCTGG AGGAGTGCTT CTTCCTGCTG 
GGGCCGCGGG CGGCGGCGGC GGGGGACGTG GTGGGGAGGA CGGGGCTGTT 
CGACGAAGTG ATGCCCGGGG TGCACTACGG GACGCGGGAG AGCGTGGGGT 
GCGCGGCGGA GCTGGTGAAG CGCGGCGTGG TCGGGGTGAG GGACTTCCGC 
TTCTTCGACG GCTTCTGCGG GTGGGAGAGA GAGCAGCTGC GCGACGAGGT 
GCGCGCGGGC TTGTGGCGCG TGGCGGCGTG CAGCCCCGCC GTGCTGGGCC 
TCGCCACCGT CGTCAAGGGC GGACTCTGGG AGGAGGTGCA GGGCCTCGTC 
GGAGAGAGGA GGGTGTGGTG ACTGATTACT TCTCAAGGGT GACCATTATG 
TAATTAATTA ATTAATTAAT CTCTTAATTA ACTCGCAAGT AAAGTATTTA 
CTCCTTTCAG ATTAATGATT TTAGGCTTTT AGTCATCACG GTAGGTTTAA 
AGAGGGTTGT ATTTGTATAC TCTGTATCTT GTACTCTTAT CGTTTTGCCC 
ACCACTACGC GAACACACCT CGATGCC

Gene models with high sequence identity

AT3G29240.2 [+] show detail - Protein of unknown function (DUF179)
E-value: 5e-67; Score: 251.00

InterPro Scan Digest

See the detailed result >

AT3G29240.2

Model type: Protein coding
Short Description: Protein of unknown function (DUF179)
Computational Description: Protein of unknown function (DUF179); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF179 (InterPro:IPR003774); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF179) (TAIR:AT1G33780.1); Has 1065 Blast hits to 1065 proteins in 382 species: Archae - 0; Bacteria - 730; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink).
Link: InterPro Scan - TAIR