K30719

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K30719

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • decreased size (PATO:0000587)
    (Seed::Shape::small)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K30719

Determination of introduced cDNA(s)

  • J033024J15 - Rice Full-length cDNAs - Original: J033024J15

    full reading [+] show sequence

    Nucleotide sequence: J033024J15 - full reading 
    CGAGCGCGGG GCAACGCGAA ACTCGCGGAG GGCTCCCAGA CCTAACCGGC 
    GGCGGTGGCG GCGGCCATGG GAGGAGCCTA CAACCTCAAG CTCCTCGCCG 
    CCCTCTCCGC GCTCGTCCTC CTCCTCGCCG CCTCGCGCCC CTTCCTCCCG 
    GGGCTCCTGG AGGCGGCCCT CCGCGCCCCC GTCCTCCCGC GCGACCTCCT 
    CCCTCTCCTG CCCTGGCCGG TGGCCCAGCC GCTGCTCCGC CGCCTCGCGC 
    TGCGCGGCGC CGCCGACCTC CTCCCGTCCT TCGTCGGCGT CGCGCGGGAG 
    CCAGGTGATG GCGGCGCCCG CGCCGCCGAG TGGAAGGGCG CCTGCTTCTA 
    CGATAACCGG GCGTGGATGG AGTTCCACAA CGGGACTGAT GGGGGCCTTG 
    GAGGTGGTAC GCTCCATCTC GAGACAAACA AAGCTCATAG CTGGACTTGC 
    ATAGACCTTT ATGTGTTTGC AACACCATAT CGTGTTACAT GGGATTACTA 
    CTTTGTAGGT CGTGAGCATA CCCTTGATTT CAAAGAATGG GAAAGCGAGG 
    CTGAATATGA ATATGTAAAA CGCAAAGGAG TATCCATATT CCTGATGCCA 
    TCTGGAACAA TTGGAACACT TAGAGCACTT TGGGATGTTT TCCCCCTGTT 
    TACAAATACT CAATGGGGTG AGAATTCAAA TCTTGCATTT CTAAAGAAGC 
    ATATGGGTGC AACCTTCGAG GAACGTCCGA AACCTTGGGT GTCAGAATTA 
    AATGTTGACG ATATCCACTC TGGAGATTTT TTGGTTTTAT CAAAAATTCG 
    TGGGCGCTGG GGTGGTTTTG AAACCCTAGA GAAGTGGGTT ACTGGAGCTT 
    ATGCTGGCCA TACCGCAGTT TGCCTCAGGG ATTCTGAAGG AAAGCTTTGG 
    GTTGGGGAAT CTGGTCATGA GAATGAACAG GGAGAAGATA TTATTGCTAT 
    CTTGCCATGG GAAGAATGGT GGGACTTTGA AGTAAAAAAG GATGATTCCA 
    ATCCTCAGAT TGCATTACTA CCTTTGCATC CAGATTTGCG TGCAAAATTT 
    AATGAGACAG CAGCTTGGGA ATATGCAAAA AGCATGGATG GAAAACCTTA 
    TGGGTACCAC AATATGATTT TTAGTTGGAT TGATACCATA AGCGACAACT 
    ATCCACCGCC ATTAGATGCT CATGTGGTTG CCTCTGTGAT GACTATGTGG 
    AACAAACTTC AACCAGAGTA TGCTGCCAAC ATGTGGAAAG AAGCCCTTAA 
    CAAACGGCTT GGAACTAAGG GTCTTGATCT ACCTGAAATC ATAGTGGAAT 
    CAGAGAAGCG TGGGATGACA TTTGACAAAT TGCTAACAGT TCCTGAGCAA 
    GATAAGTGGG TCTATACTGA TGGCCAGTCT GCTTCTTGTG TGGCTTACGT 
    CCTTATGATG TACAAGGAGG CTGGACTCTT TGACCCAATT GCCAGCTCTA 
    TAGAAGTTAC TGAATTCACC ATAAAAGATG CTTACAGCCT CAACTTTTTT 
    GAGAACAATA TGACACGGCT TCCCGTGTGG TGCAACAAAG ATGACAGTGT 
    CAAGCTCCCC TTCTGCCAAA TAAAGGGCAG GTATCGAATG GAGTTGCCTG 
    GATACAACAC CATGCAGCCG TACCCTCACA TGAATGAAAG GTGTCCTTCT 
    CTGCCTCCGA ATTATAACAG ACCGCGAAAT TGCTGATCTG TTACACATTA 
    TTACGCCTTG CATTTTGATA TATGCTGGCT TTTAGTCTGT ACTTTAGCTG 
    TACATATCAC TGTAGTCTGT AGGTATGCAA TTGTTTTCTT TGTTGTTACT 
    ACGAAGCAAC TTCCGCAAAT AAGGAAGATT ATGATTGCGT GAATGTACAG 
    TAAATCTCTA CCCTTGATGC TACAGGTGTT ACACTGCTGT AGGGTTCACA 
    TAACTTTCGT CATATAGTAA TTGACAAATA CATGT

    Gene models with high sequence identity

    1. AT4G27020.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: vacuole; BEST Arabidopsis ...
      E-value: 0; Score: 784.00

     

    InterPro Scan Digest

    See the detailed result >

    AT4G27020.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: vacuole; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G54870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR