K30906

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K30906

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K30906

Determination of introduced cDNA(s)

  • J033080J10 - Rice Full-length cDNAs - Original: J033080J10

    full reading [+] show sequence

    Nucleotide sequence: J033080J10 - full reading 
    GGCTGCTGTC CCAACTGTAG CAGTAGCCAC CACCTTCTCC ATCTCGTCGG 
    CTCTGATTAG ATTTCTTGAT GTCGTGTTAG CCTTTCCCTG TTCCTTTAGC 
    TAAAGAATTT AACGGCAGTG GGGCAGAGAC GGATTGATGC CATTGTTCGA 
    TTCTTTCTCC TCCTTTTGCT TCCTTTTAAG CATTGCTTTT CCTGGCCATC 
    CTTTTCCATT CCCATTTGTT TTGTAGGCTA GCTGCCATAG CCTTTTTCTC 
    GTCTTCCAGG GCTAGTATCT CAGTATCTCC ACTTGCTTCT CATTCTTATA 
    ATCGTCGTCG TCGTCTTCCT CTGTGATCTG TGGTTGCCTT CTCTGCTTCG 
    CCTCCATTTC TGTTCTTGGC TGCTTGTTCT TCTTCTTGGG CGTTGTTAGC 
    CAAGAAAGCG AATTCGTTTC TTTTTTTCTT GAGCGATTTG AGCTCGGTTC 
    TTTCTGCTTT GGACAGCGAT TGAGTGAATG AGTGAGTGAG TGAGTGAACT 
    CAGGGCCTTT CCTGCTTTCT TCATGGACAG CTCACTCTGC ACAGCTCAAG 
    GTTCTTGCTG AGTGAAGCAG AGAACTTTAG CTGCTGCCGC CATGGATAGG 
    GCGTCAAGAT CAGGTGTTCT TTCAGAGACG GCTTCTTTCG CCGACACTCC 
    GAGGTCCATC TATTCGTCCT GCAATCTCCA GCATCTTCAG TCACAGAGTA 
    TCCGGAAGAT ACATGAAGGT GCCTTGGATA TATCGCCACG ATTCTCCTAC 
    TGCAAACCTA ATGCTAGTCA GGACAAGATA CTGCACAGAA GATTCTCACT 
    TAACTTGCCA GAGCATATGC CAGGCCATTA CTCCAGGACA GTAACTGAAA 
    GAAATCAAAA GGCTGCTTCA AAGTCCATCA CAGATCTAGT CGTGGAGATT 
    GCGGCCCTTG AGCAGGAAGT CGTCCGAAAG GAATTGCATC TGCTATCCCT 
    CTATAGAAAA GCATTTGATC AGTATTTATC GGAGTCTGGC AGTGTTACGA 
    GTGAGGTGGA TCAAGAATTG CTGAAAAACA TTGACGAGGG TGCCCTTCGT 
    TTGAAAGACA TCAAGCAATC TGCAGCCTTC AACTTACCAA TAGTCTCAGA 
    TACTAAAAGT GAGGTATCAA GATCACCTTC AAGGCATTCC AGCCTTGTTA 
    ACTTCTTGAG TGCATCTATT TCTGAATATG TACCCAAGAT CTCTTGCAAA 
    CTATCAGAAG ACATTCTGAG CTGCATAGCT GCTGTCTACT GTAAACTCGG 
    AAGCGTGCCA CTGCAAGATA GCGAATACAT AACCTCCCCC AGTCCTTCTG 
    TTTCATCTTC AAGTACTTTT TCTCCGAGGA ACCGCAATGA TAGCTGGAGC 
    CCTCGGTACA ACTTCGATAT CACCCCGAGC CCTCGCCAAT ATGGATACGA 
    GAAAGAGAAT AATGAACAAA AGAACATAGG CATGATAATT GTCCCAAGGA 
    TACGAATAGA TGCTGACAAG TTTGATTACG CCTCAAAAAT GCTTGAGACT 
    ATCAGGTCCC TGATTCAACG GCTTGAAAAA ATTGACCCAA CAAAGATGAC 
    ACACGAGGAG CAACTCTGCT TTTGGATTAA CATCCACAAT GCTTTAGTCA 
    TGCATGCATT TTTGGCCTAC GGGCTGCACG ATAAACGCAT GAAAAGCACG 
    GACATGATTC TGAAGGCTGC GTATAATGTT GGTGGGCAGT CAGTAAACGC 
    TCAAATAATC CAGAACTCAA TTCTTGGATG CCAATCCCAT CGTCCTTCGC 
    TGTGGGTTCG GGCGCTGTTC GCACCAACGA AGAGATCCAT GGCAGGGACA 
    GCCAGGCATC CATATGCCCT TCAGCATCCA GAGCCAGTTG CTCATTTTGC 
    CCTCTCCACT GGAGCATTTT CAGATCCACC TGTGAGGCTG TACAGTGCGA 
    AGAAGATACA CCAGCAGCTG GAGGTGGCGA GGACGGAGTT CATCCAGGCG 
    AACGTGGTGG CGAGGAGGCA GGCGCTGATG CTGCCCAAGG TGCTGCACTA 
    CTACGCCAAG GACGCGGCGC TGGAGCTGCG GCATGTGGTG GAGCTGGTGT 
    GCGAGAGCAT CTCGGAGGCG CAGCAGCGGG AGATCCAGCT CTGCCTCAGG 
    AGGAGGATCG ACAAGTGCGT CGAGTGGCTG CCCTACAAGT CCTCCTTCAG 
    ATACGTTGTA CATAGGGACC TGGCCGAGTA GGCATGCAGC AAAAAAGGAT 
    TTGGGTTCGT TTTATTCTTC TTCTTCTTCT TTTCTTTGTT TTCTTTTCTT 
    TTTTGTTTGA AATTCAAATT TCAAATTGCG GTTTGGATGT GCAGTGCTGT 
    CTCGTTGTGG TGTAAGTAAA AGAACGGATT TCTGGTGAGG GCAATGGCGT 
    GGGTTGGGTT TGTAATGGAT TTTGCGTTGT GTGTGTATGT GTGTGTAAAT 
    ATAGGTGATT TGTGAGTTGT GATGCT

    Gene models with high sequence identity

    1. AT5G66600.4 [+] show detail - Protein of unknown function, DUF547
      E-value: 4e-72; Score: 270.00

     

    InterPro Scan Digest

    Program Description E-value
    Coil coiled-coil 0
    Coil coiled-coil 0
    HMMPanther UNCHARACTERIZED 1.1e-83
    HMMPfam Protein of unknown function DUF547 1.8e-36

    See the detailed result >

    AT5G66600.4

    Model type
    Protein coding
    Short Description
    Protein of unknown function, DUF547
    Computational Description
    Protein of unknown function, DUF547; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF547 (TAIR:AT2G23700.1).
    Link
    InterPro Scan - TAIR