K31238

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K31238

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K31238

Determination of introduced cDNA(s)

  • J033058A07 - Rice Full-length cDNAs - Original: J033058A07

    full reading [+] show sequence

    Nucleotide sequence: J033058A07 - full reading 
    GTGTACACAA CACCGTATAC TGTCCCTTCC GGTCAAAGTA CACTGCCCGC 
    TGACAGTGAC CAGAGATTCT ACTCCAGCTT GCTACTCATT TTCGAGGGTG 
    TTGATCATGG ATCCGACCTC GGTGCCATGG AGCTCCATGG TGTACGGTCT 
    CCTGGGGCTC GCGCTTCTGT GGCAGGTCCA CCGGCTGCTG GTGCGGCTGT 
    GGTGGCAGCC GCGGCGGCTG GAGCGGGCGC TGCGGGCGCA GGGCGTCCGT 
    GGCACGTCCT ACCGCTTCCT CACCGGCGAC CTCAAGGACT ACGGCCGGCT 
    GAGCAAGGAG GCATGGGCGA GGCCGCTGCC GCTGCGGTGC CACGACATCG 
    CGCCGCGCGT GGCGCCGTTC GTGCACCGGA CCATCGCGGA GCACGGCAAG 
    GCGTGCCTCT CCTGGTTCGG CCCCATCCCC AAGGTGACCA TCGCCGACGC 
    CGAGATAGCC AAGGACGTGC TGTCCAACAA GATGGGCCAC TTCGAGAAGC 
    TCAAGTTCCC CGTGCTGTCG AAGCTGCTCG CCGACGGCGT GGCCAACTAC 
    GAGGGCGAGA AGTGGGCCAA GCACCGGCGG ATCCTCAACC CTGCCTTCCA 
    TCTCGAGAAG CTCAAGCTCA TGCTGCCGGC GTTTTCTGCG TGCTGCGAAG 
    AACTGGTCGG CAGATGGGCG GCGTCTCTTG GTTCTGACGG TTCGAATGAG 
    ATCGATGTTT GGCCGGAGAT GCAGAGCCTC ACCGGAGATG TCATTTCTCG 
    CACCGCATTC GGCAGCAGCT ACCTTGAAGG AAGAAGGATT TTCCAGTTGC 
    AGGCTGAGCA ACAGGAGCTT TTCATGGGTG CCATTCAGAA GATCTCCATT 
    CCAGGCTACA TGTCCTTGCC TACCTAAAAC AACCGAAGGA TGTATCAAAT 
    TAAGAACGAG GTTGAATCAA TTATACGAGA TCTGGTCCAG AAAAGGATGC 
    ATGCTATGAA AGATGGCGAG AGAACCAAAG ATGATTTGCT CGGGATATTA 
    CTAGAGTCAA GCACGAGGCA TGCAGACGAG AATGGACATT CAGGCCCGGG 
    GATGACCATC GAAGAAGTGA TGGAAGAGTG CAAAGTGTTC TATTTTGCAG 
    GGATGGAGAC GACAGCGATA CTCCTCACAT GGACCATGGT TGTGCTAAGC 
    ATGCACCCAG AATGGCAGCA CCGTGCAAGG GAGGAGGTCC TAAGCCTATT 
    TCAGAAAAAC AAACTTGATT ATGAAGGCCT GAGCAAACTC AAAACGTGAC 
    GATGATACTT TACGAGGTTC TCCGCTTGTA CCCGCCGGGA ATTGGGTTTG 
    TCCGGCAAAC ATACAAGGAG ATGGAGATCG GTGGCGTCAA GTACCCTGCA 
    GGCGTGATGA TCGAGCTACC GTTGTTGTTC ATCCACCATG ACCCAGACAT 
    CTGGGGGAGC GATGTGAACG AGTTCAAACC GGAGAGGTTC GCCGAGGGGA 
    TCTCCAGGGC GTCCAACGAT CATGGCGCGT TCTTCCCGTT TGGCTGGGGC 
    CCGAGGATCT GCATGGGCCA GAACTTCGCG CTGCTCGAGG CCAAGATGGC 
    GCTGTGTATG ATTCTCCAGC GCTTCGAGTT CGAGCTAGCG CCGTCTTACA 
    CTCACGCTCC CCATATTGTG TTGATGCTGC GTCCGATGCA TGGGGCACCA 
    ATTAAGTTTA GGGCAATCTG ATCGTCGATC TTGTGATGTT CATATCATGC 
    ATTGTAGGCT TTTTTTTTAA AAAAAAATGG CATGTTTGGT TTATACCAAT 
    CAACCATGCC ACCAAAAAAT AATTTAGCCA TATCAATAAA TTAATTCTCC 
    ATTTAGTTTG T

    Gene models with high sequence identity

    1. AT3G14680.1 [+] show detail - cytochrome P450, family 72, subfamily A, polypeptide 14
      E-value: 5e-145; Score: 181.00

     

    InterPro Scan Digest

    Program Description E-value
    PatternScan Cytochrome P450, conserved site 0
    HMMPfam Cytochrome P450 1.2e-33
    HMMPfam Cytochrome P450 1.1e-15
    HMMPfam Cytochrome P450 2.1e-17
    FPrintScan Cytochrome P450, E-class, group IV 2.5e-07
    FPrintScan Cytochrome P450, E-class, group IV 2.5e-07
    FPrintScan Cytochrome P450, E-class, group IV 2.5e-07
    FPrintScan Cytochrome P450, E-class, group IV 2.5e-07
    FPrintScan Cytochrome P450, C-terminal 7.4e-07
    FPrintScan Cytochrome P450, C-terminal 7.4e-07
    FPrintScan Cytochrome P450, C-terminal 7.4e-07
    FPrintScan Cytochrome P450, E-class, group II 8.4e-05
    FPrintScan Cytochrome P450, E-class, group II 8.4e-05
    superfamily Cytochrome P450 2.2e-43
    superfamily Cytochrome P450 4.9e-26
    superfamily Cytochrome P450 1e-23
    Gene3D Cytochrome P450 6.8e-38
    Gene3D Cytochrome P450 4.6e-22
    Gene3D Cytochrome P450 2.7e-18
    HMMPanther CYTOCHROME P450, SUBFAMILY 72 1.6e-93
    HMMPanther Cytochrome P450 1.6e-93
    HMMPanther CYTOCHROME P450, SUBFAMILY 72 5e-54
    HMMPanther Cytochrome P450 5e-54
    HMMPanther CYTOCHROME P450, SUBFAMILY 72 3.7e-67
    HMMPanther Cytochrome P450 3.7e-67

    See the detailed result >

    AT3G14680.1

    Model type
    Protein coding
    Short Description
    cytochrome P450, family 72, subfamily A, polypeptide 14
    Curator Summary
    putative cytochrome P450
    Computational Description
    "cytochrome P450, family 72, subfamily A, polypeptide 14" (CYP72A14); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 15 (TAIR:AT3G14690.1); Has 31683 Blast hits to 31570 proteins in 1600 species: Archae - 65; Bacteria - 4593; Metazoa - 11348; Fungi - 6189; Plants - 8077; Viruses - 3; Other Eukaryotes - 1408 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR