K31611

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K31611

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K31611

Determination of introduced cDNA(s)

  • J033112C21 - Rice Full-length cDNAs - Original: J033112C21

    full reading [+] show sequence

    Nucleotide sequence: J033112C21 - full reading 
    GATGTCTTTC TGCCTCACCG CTGCCTCTGC CTCCTTCCAA ATGCTTCGCC 
    CCCCGAGCTC TCCTCGGCGT GCGCGGCGCA GCGCCATCCA CCCCGACAAC 
    TCCTCCCAAC CCCCAACCTA TCCAAACACA TTTTCTTGCC CGCCCCTGCA 
    GCTCCCTCCA CCGCGCCACC CATCCATCGC CAGCCATGCA CACCCTCGCT 
    CTGACGACCC TGTCACGTTG AGCTACGCTC GGAGGAGGAC GCCACGACGG 
    CGACCGGGAA GAAGATGAAC CCGCTCCCTC CCCCGGCCAG CCGGCTGTGG 
    GAGGCGAGCA TCCGCAAGCT CAAGTACTCC ACCATCCTCC GCGGCTCCGT 
    CGTCCCCTCC GGCGCCGCCT TCGATGGTGC GGCGGCGGCG GCCACCGGAG 
    GTGACCCCGT CACGCTCACC CCAAGCCTCT CCGTCAGCTC CTCCACCTCC 
    AACACCATCT ACCAGTACGA AGACGGCGAC GACGACATCG ACTCCGTCCT 
    CGACGACGTC GACACCGACG ACGACGACGT CGACGAGGCG TCCCTCGGCG 
    AGCCCAGCCA CTCCGACCAG CTGCTGCCCA GCGGAGACTT CTACCAGGGC 
    GACCTGCGCG GCGACCTCCC CCACGGCGCC GGCAAGTATC TCTGGACGGA 
    CGGCAGCATG TACGAGGGGT CGTGGCGCGG CGGCCGCGCG GCCGGGCGCG 
    GCAAGTTCTC GTGGTCGTCG GGCGCCATCT ACGAGGGCGA CCTCGCCGGC 
    GGGTACATGC ACGGCCAAGG AACCTACATC GGCGAGCTCG GGGACACGTT 
    CGCCGGGCTG TGGGCGAACA ACCTCCGGCA CGGCCGCGGC ACGCAGGCGT 
    ACGTCAACGG CGACGTGTAC GACGGCCACT GGCGCGACGG GCTGCAGGAT 
    GGGCACGGCC GGTACATCTG GCGCGGCGGC CACGAGTACA TCGGGACGTG 
    GAAGGCCGGC GAGATGCACG GCCGCGGGAC GGTGATATGG GCGGACGGCG 
    ACCGGTACGA CGGCGCGTGG GAGGACGCCA AGCCCAAGGG GCAGGGCACG 
    TTCCGGTGGT CCGACGGCGG GATGTACATC GGCCTGTGGT GCCAGGAGTC 
    CGGCGAGACG CAGGGCAAGG GCGTGTACTA CCCGCCGTCC GGTGGCCCGG 
    CGGTGCCGTT GCCCCGGGAA CCCAAGGAGG TGATCACGAA GCTGCTCGAG 
    GAGCTGGAGA TGTCCGAGGG GAAGACGGTG TCGCTGCTGC CGTCGCAGAA 
    GGTGCTGACA TGGCCCGGGG TGGAGCCCGT GACGAAGAAG CCGGTGTGGC 
    GGCCGCCGGA GGTCGCCGCT GACCAAGGGA TGTGGCGGCC GCCGGAGGTC 
    GGAGCTGACC AAGGGAGGAG GTCGAGCAGG AGGAACAGCA TGTCGTCCGA 
    CATTGACAGC CTGGTTGAGG GGGAGGACGG CGGCGAGGAG ACTCGCAACG 
    ACAGGTCATG GGTGCGGACA CCGTCGTGTA TGCGCGCGCC CACGCTGCCG 
    AAGCCGGGGA AGAAGCAGGG GGAGACCATC TCCAAGGGCC ACAAGAACTA 
    CGAACTGATG CTCAACTTGC AGCTGGGTAT CAGACATGCT GTAGGAAGGC 
    AGTCAGCTCC TGCTTCATTG GATCTTAAAT CATCAGCATT TGATCCGAAA 
    GAGAAGGTGT GGACAAGATT TCCTCCTGAA GGATCAAAGC ATACTCCTCC 
    TCACCAGTCA TGTGATTTCC GGTGGAAGGA CTACTGTCCA TTGGTTTTCA 
    GGACTTTGCG CAAGCTCTTT GATGTTGACC CAGGAGACTA CATGCTCTCC 
    ATTTGCGGGG ATGATGCACT GCTGGAGCTT TCATCTCCCG GTAAAAGTGG 
    AAGTTTCTTT TATTTCACCA ATGATGACAA GTACATGATC AAAACAATGA 
    AGAAAGCAGA AGTTAAAGTA CTTCTGAGGA TGCTTCCAGC CTATTATAAA 
    CATGTTCGAT CTTTTGATAA TACTCTAGTA ACAAAATTTT TTGGCCTGCA 
    TTGTGTTAAA ATTACAGGAG CTATTCAGAA AAAGGTTCGG TTTGTTATAA 
    TGGGGAATCT TTTCTGCTCC AACTATTCAA TCCACAGACG CTTTGATTTG 
    AAAGGATCAT CACATGGTCG CACAACGGAC AAACCCCTCG ATCAAATTGA 
    TGAGACTACC ACTTTGAAGG ACCTTGATCT AAATTTCATT TTCCGGTTAG 
    AGGGATCATG GTATGAAGAT TTCTGCAGGC AAGTGGACAA AGATTGTGAG 
    TTTCTGGAGC AAGAGAGAAT TATGGATTAC AGTCTTCTGG TTGGCGTTCA 
    CTTCAAAGAC CGATGCAAAG ACAGCAGCAG TCCTGACAAC GAGACAACTC 
    AAACTGCTCT TGAAGATGAG GAAAAAAGAA AAGCACCAGT CAAGCTAGGG 
    ATTGGCATGC CCTCAAGGGT GGAGAATGTT GTGAAGAATC CTGAAAGCGA 
    ATCCCAGCTC ATTGGCGAAC CAACAGGGGA ATTCCAGGAC GTTATCCTGT 
    TCTTTGGAAT CATTGATATC CTACAAGACT ATGATATCAG CAAGAAGCTT 
    GAGCATGCCT ACAAATCCAT GCAATATGAT CCCAACTCCA TATCGGCTGT 
    TGATCCAAAG CAATACTGCA AAAGGTTCAG GGACTTCATT TACAGGGCTT 
    TTAGTGAAGA CGTACAGTAA ATACGTCATT AACAAAAGGG AACACTCTTA 
    ACTCTTAACT CAAGAAAGCA TAACGACCAG CCGATGGATG TTTTTTTTGG 
    CCATTCCAGG ACTATTTTGT AGGTAAGATC ATTCATTCAT TATGTTGTAG 
    ATGGCAATAC GTAATTAGTC TGACGGTTTC TGCCCCTGGT GGGTGTATAG 
    ATTTTGTACA TTTCCCAAAT CTTTTCATGT GTAATTACTA ATTAGAAGTA 
    GTGTACTTGT ACTCATGTCA ATTGACATGA AAAGGATGTA GGACAGAAAT 
    TGTTGACCAT GTAACAGTTC TTTCATTTTT GTTTTACTTA TTTCCTCTTG 
    TAGCAAAATA GTTGTTATAT GAGCAATACT TAATC

    Gene models with high sequence identity

    1. AT3G07960.1 [+] show detail - Phosphatidylinositol-4-phosphate 5-kinase family protein
      E-value: 0; Score: 870.00

     

    InterPro Scan Digest

    Program Description E-value
    Gene3D no description 1.5e-08
    Gene3D no description 1.5e-11
    Gene3D no description 1e-55
    Gene3D no description 6e-52
    HMMPfam Phosphatidylinositol-4-phosphate 5-kinase, core 2.9e-86
    HMMPfam MORN motif 0.00012
    HMMPfam MORN motif 0.00033
    HMMPfam MORN motif 0.15
    HMMPfam MORN motif 0.0015
    HMMPfam MORN motif 0.001
    HMMPfam MORN motif 5.7e-07
    HMMPfam MORN motif 0.0011
    ProfileScan Phosphatidylinositol-4-phosphate 5-kinase, core 68.788
    HMMPanther PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 2.5e-174
    HMMPanther Phosphatidylinositol-4-phosphate 5-kinase, core 2.5e-174
    superfamily SAICAR synthase-like 5e-116
    superfamily Histone H3 K4-specific methyltransferase SET7 3.5e-24
    superfamily Histone H3 K4-specific methyltransferase SET7 9.8e-15
    HMMSmart MORN motif 0.039
    HMMSmart MORN motif 0.0077
    HMMSmart MORN motif 1.7
    HMMSmart MORN motif 0.35
    HMMSmart MORN motif 0.00025
    HMMSmart MORN motif 3.7e-05
    HMMSmart MORN motif 0.0013
    HMMSmart Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup 2.1e-166
    HMMPIR Phosphatidylinositol-4-phosphate 5-kinase, plant 0

    See the detailed result >

    AT3G07960.1

    Model type
    Protein coding
    Short Description
    Phosphatidylinositol-4-phosphate 5-kinase family protein
    Computational Description
    Phosphatidylinositol-4-phosphate 5-kinase family protein; FUNCTIONS IN: 1-phosphatidylinositol-4-phosphate 5-kinase activity, phosphatidylinositol phosphate kinase activity, ATP binding; INVOLVED IN: phosphatidylinositol metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, plant (InterPro:IPR017163), MORN motif (InterPro:IPR003409), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: phosphatidylinositol- 4-phosphate 5-kinase 5 (TAIR:AT2G41210.1); Has 28977 Blast hits to 7880 proteins in 615 species: Archae - 0; Bacteria - 4479; Metazoa - 4240; Fungi - 468; Plants - 2497; Viruses - 0; Other Eukaryotes - 17293 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR