K33615

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K33615

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K33615

Determination of introduced cDNA(s)

J033096A13 - Rice Full-length cDNAs - Original: J033096A13

full reading [+] show sequence

GACTCTCCCC ACCAAATTCC CCCAAATCGC AGCTGTTCGC CACCCGCATT 
GCGCCGCCAT TGCCTCCAAA TCCGAGTACT CCTTGAGTAA TCTCAGATCC 
ATCTCGGGTT CCTCCCGCCG TTGGCAGCAG CCGGAGCTTT TTTCCGCGGA 
AGAAATGGCG CCGTTTCGGT GAGTTCTTGG CAGTTTGGGA TGATGCTTGG 
TGGGTAGGAG GACTAGGAGT GCGGCGGCTC GGGGAGAGGC TGCGATGGAG 
AGCGCCGCCG GGGAGGAGGG GAAGGCTGCC CCGTCGCTTC CCCTGGCGAC 
CCTGATCGGC CGCGAGCTCC GCGGCGGCGG CTCCGAGCGG CCGCTCGTCC 
GGTACGGCCA CTTCGGCTTC GCCAAGCGCG GCGAGGACTA CTTCCTCGTC 
AAGCCCGACT GCCTCCGCGT CCCGGGCGAC CCTTCCTCCG CCTTCTCCGT 
CTTCGCCGTG TTCGACGGAC ACAATGGCGT GTCGGCGGCG GTGTTCAGCA 
AGGAGCACCT GCTGGAGCAC GTGATGAGCG CCGTGCCGCA GGGCATCGGC 
CGCGACGACT GGCTGCAGGC GCTGCCGCGC GCGCTGGTCG CGGGCTTCGT 
GAAGACGGAC ATCGACTTCC AACGCAAGGG GGAGGCATCA GGGACGACAG 
CGACGCTGGT CGTCGTCGAT GGGTTCACGG TCACGGTGGC GTCTGTTGGG 
GACTCCAGGT GCATATTGGA CACGCAGGGC GGTGTGATCT CGCTGCTAAC 
CGTGGACCAT CGTCTCGAGG AGAATGTAGA GGAGCGGGAG CGCGTCACCG 
CGAGTGGAGG GGAGGTCAGC CGGCTCAACC TGTGTGGTGG ACAGGAGGTG 
GGACCTCTCA GATGCTGGCC AGGTGGATTG TGCCTTTCAA GATCGATTGG 
GGATACTGAC GTTGGGGAGT TCATTGTGCC AATTCCACAT GTCAAGCAAG 
TGAAGCTATC AAATGCTGGA GGGAGGCTAA TAATTGCATC AGATGGAATT 
TGGGATGCAC TGTCCTCAGA AGCTGCTGCT CAGGCATGCC GAGGATTGCC 
TGCAGAGCTG GCTGCAAAGC TTGTCGTGAA GCAAGCACTG AAGACAAGTG 
GGCTGAAAGA TGACACCACC TGTGTGGTTG TTGATATCAT CCCATCTGAT 
CATTCTTCAA CACCTCCATC ACTATCTCCA AAGAAAAACC AGAACAAGTT 
GAGATCTCTT CTTTTTGGTA GGAGGTCACA TAGTTCTGTT GGAAAGCTTG 
GAAACAAGTC TGCTTCATTT GACTCTGTGG AGGAATTATT TGAAGAGGGT 
TCCGCAATGT TGGATGAAAG GTTGGGTAGG AATTTTCCAT CAAAAGCAAA 
CTCGTCCCCA TCTCGCTGTG CAATCTGCCA AGTGGATCAA GCACCTTTTG 
AAGATTTAGT GACAGATAAT GGAGGTGGTT GCTGTTCTGC CCCATCGACA 
CCATGGGTTG GCCCTTATCT TTGTTCAGAT TGTAGGAAAA AGAAGGATGC 
AATGGAAGGT AAAAGATCTA GTCGCTCAAC AGCGTGCAGG TGAAATTGCC 
AATAGGACTA ACTGGTCCTT GTTCGTGCAA ACTGGTCTCC TGGTTCGGTT 
GTCTGCCACA TGTAAAAAGA GGATAATAAT CTGTTTGCTG CTGGATCCAA 
GTATTATTGG TGAAACTAAC TGCAATCTAG CCTGAACTGA ACAAATTGGG 
CTACTAACAA TCTTGGGAGT CTATCAACAG CGCAGATGAA AATTTCTGTT 
TGCACTGGGA AGATAGCTCA CAGGATTTCA ACCCCGTAGT TTTTTTTTTT 
TTTTTTTTGA ACCTTAGTAT GTAAAGTGAA ATGTCTAGCT TAACAATGTT 
TGTAAGAGAT GGCAATTGGC AAGGCTCCTT GTTCTACCTT GGAATGTATA 
TGCTTGTGGA GCCGAACAGA CTAATTTATT TATCTCATGC TATCCTAATC 
AATGGTAATG TCTTTCGGTG TTCT

Gene models with high sequence identity

AT1G09160.2 [+] show detail - Protein phosphatase 2C family protein
E-value: 3e-162; Score: 569.00

InterPro Scan Digest

Program	Description	E-value
HMMSmart	Protein phosphatase 2C-related	3.2e-59
HMMSmart	Protein phosphatase 2C-related	0.0011
Gene3D	Protein phosphatase 2C-related	9.8e-49
HMMPanther	PROTEIN PHOSPHATASE, PLANT	2.6e-176
HMMPanther	Protein phosphatase 2C	2.6e-176
superfamily	Protein phosphatase 2C-related	1.7e-51
HMMPfam	Protein phosphatase 2C, N-terminal	2.1e-36

See the detailed result >

AT1G09160.2

Model type: Protein coding
Short Description: Protein phosphatase 2C family protein
Computational Description: Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G68410.2); Has 5570 Blast hits to 5569 proteins in 486 species: Archae - 4; Bacteria - 416; Metazoa - 1194; Fungi - 467; Plants - 2390; Viruses - 7; Other Eukaryotes - 1092 (source: NCBI BLink).
Link: InterPro Scan - TAIR