K33625

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K33625

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K33625

Determination of introduced cDNA(s)

  • J023004J10 - Rice Full-length cDNAs - Original: J023004J10

    full reading [+] show sequence

    Nucleotide sequence: J023004J10 - full reading 
    GACCCCCCCA TTCCGCCGCC CCCACCCCCA GATCTACTCC ACCGCCACCG 
    CCACCGACAC CCCCGTCTCC GGCGAGTCCC CCCGCCGCCT CCTCGCCGGA 
    GAACCCGCCT CCCCTCCCCC AACCCTAAAG CCTCCCCGTC TCATTCGCCC 
    CCCCACCGGA TCCAGATCAA AACCACACGC CGATCCAGAT CCCGCCGGGC 
    GCCCAGCCAT GGCGCGCCTC CTCCCCTTCC TCGTCGCGGC GGCGGCGGCG 
    TTGGTGGCGG TGTCCCTCTC CGCGCCAGGC GCCGACGGGT TCTACCTCCC 
    GGGGAGCTAC CCGCACAAGT ACAACCCCGG CGAGCCGCTG AGCGTGAAGG 
    TGAACTCCCT CACCTCCATC GACACCGAGA TCCCCTACAG CTACTACAGC 
    CTCCCGTTCT GCACCCCTCC CGACGGCGTC AAGGACAGCG CCGAGAACCT 
    CGGCGAGCTC CTCATGGGCG ACCGCATCGA GAACTCCCCC TACCGCTTCC 
    GGATGCACGC CAACGACTCC GACCTCTTCC TCTGCCGCTC CCCGCCGCTC 
    GCCGCCGACG CCTTCAACCT CCTTAAGAAG CGGATCGACG AGATGTACCA 
    GGTTAACCTC ATCCTCGACA ACCTCCCCGC CATCCGCTAC ACCAAGAAGG 
    ACGACTACTT CCTCCGATGG ACCGGCTACC CCGTCGGCAT CCGCGTCGGC 
    GTCGACTACT ACGTCTTCAA CCACCTCCAG TTCACCGTCC TCGTGCACAA 
    GTACGAGGAG GCCAATGTCG CCCGTGTCAT GGGCACCGGC GACGCCACCG 
    ACGGCTTCCC TTCCACCGGC AAGGACGGCA GCGGCGGCGC CGCCGGGTCA 
    TCCGGCTGGA TGGTTGTCGG CTTCGAGGTC GTGCCTTGTA GCATCAAGCA 
    CAACCCCGAC GACGTCAAGT CGCTCAAGAT GTATGGCAAG TACCCGAGGA 
    GCATCAAGTG CGACCCGACC ACCGTGTCCA TGAGCATCAA GGAGAACGAG 
    CCCATCGTGT ACACCTACGA GGTGTCGTTC GTCGAGAGCG ATATCAAGTG 
    GCCCTCGAGG TGGGACGCAT ACCTCAAGAT GGAGGGTGCC AAGGTGCACT 
    GGTTCTCGAT CCTCAACTCG CTCATGGTGA TTGCTTTCCT TGCTGGTATC 
    GTGTTTGTCA TATTACTGAG GACCGTGAGG CGTGATCTGA CGAGGTATGA 
    GGAGCTTGAC AGTGAAGCGC AGGCGCAGAT GAACGAGGAG CTGTCTGGGT 
    GGAAGCTTGT TGTCAGTGAT GTTTTCCGCG CGCCAAGCAA CCCAATGTTG 
    CTCTGCGTTA TGGTCGGGGA TGGTGTTCAG ATCCTTGGGA TGGCAGTGGT 
    GACCATTCTG TTTGCGGCGC TTGGGTTCAT GTCACCAGCT TCCCGCGGTA 
    CTCTGATCAC GGGCATGCTG TTCTTCTATC TGGTTCTTGG AATTTTGGCA 
    GGATATGTGG GTGTTCGTGT GTGGAAGACA ATCAAGTGCG GTGATCATAC 
    AGGGTGGATG GCTGTTTCAT GGAGGGTAGC TTGCTTCTTC CCCGGCATTG 
    CATTCCTGAT CCTTACCACT CTGAACTTCC TGTTGTGGGG AAGCCAAAGC 
    ACAGGAGCCA TCCCCTTCTC GTTGTTTGTC ATATTGATTC TGCTCTGGTT 
    CTGTATCTCT GTGCCGCTTA CACTTGTAGG TGGACTCCTC GGTGCCAAGG 
    CACCGCACAT TGAGTACCCC GTGCGCACTA ACCAGATCCC TCGTGAAATC 
    CCACCTCAGA AGTACCCATC CTGGTTGCTG GTTCTCGGCG CTGGCACACT 
    GCCCTTTGGT ACCCTGTTCA TCGAGCTCTT CTTCATCATG TCTAGCATAT 
    GGATGGGGCG TGTGTACTAT GTCTTTGGAT TCCTCTTCAT CGTCCTGTTG 
    CTCCTTGTTA TTGTCTGCGC TGAGGTTTCC CTTGTTCTGA CCTACATGCA 
    TCTCTGTGTC GAGGATTGGA AATGGTGGTG GAAATCATTC TTCTCATCTG 
    GATCTGTGGC GATCTACATT TTCTTGTACT CGATCAACTA TCTTGTTTTT 
    GACCTAAAGA GCTTGAGTGG ACCTGTGTCG GCGACCCTCT ATCTCGGCTA 
    CTCACTCTTC ATGGTTATTG CTATTATGCT GGCTACTGGA ACAGTGGGAT 
    TCATTTCATC ATTCTGCTTC GTCCACTATC TTTTCTCATC CGTGAAAGCA 
    GATTAAGCTC ATCCCGATGC AGAGTGTATT ACTCAAATGA GAGGTGAGAA 
    TAGTGGACAT CAAAAAGCTT GTAGTCACAA AATCTTAGCT CATGTCATCT 
    TTTGGTATAC AAAGACTGAA TAACTATTGT AAGCTTTACT AGGATTTATC 
    AATGGGTTTT ATGGAGAGAT GTGCTAGCAG CTTGCACGAT GTAATAGAAT 
    GAATTGGTTT ATCC

    Gene models with high sequence identity

    1. AT5G35160.2 [+] show detail - Endomembrane protein 70 protein family
      E-value: 0; Score: 999.99

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Nonaspanin (TM9SF) 4.6e-183
    HMMPanther ENDOSOMAL PROTEIN-RELATED 0
    HMMPanther Nonaspanin (TM9SF) 0

    See the detailed result >

    AT5G35160.2

    Model type
    Protein coding
    Short Description
    Endomembrane protein 70 protein family
    Computational Description
    Endomembrane protein 70 protein family; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT4G12650.1).
    Link
    InterPro Scan - TAIR