K35305

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K35305

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • decreased size (PATO:0000587)
    (Seed::Shape::small)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K35305

Determination of introduced cDNA(s)

  • J033020F07 - Rice Full-length cDNAs - Original: J033020F07

    full reading [+] show sequence

    Nucleotide sequence: J033020F07 - full reading 
    GTTTTCCTTG CCAAATCCCA TCTCCATTTT CCTCTCTTTC TCGTTGCGAT 
    TTGAGAATTC ACCTTCTTCT TCCTCCTCTC GCCTCCTACC TCTTGCTGCA 
    GCGCACGGCG CCGCGCCGTC ATCTCGTGCT TGTATCCTTG TTCTTCATCT 
    TCTCTCACCT TCCCTTGAGA AGATTTGTTA TTACTAGTTT AATATTTCTA 
    GGAAAGAGGA GAAGAGGAGA GGAGAGGAGA GGGTGGTAAC GCAGCGTTAG 
    GTGGGGGCGT GCTAGGGAGT CAAGAACAGA AGGAAGGGAG GCCCAACTGC 
    TCCATCCTCC CTTTCCCCAA ATCCACTCCT TCCTTTCGAT TTGCCTCCTT 
    CCTTCCTTGG TTCATTCATT GATTTTTGCA CCGCATTTGA GGAAGAATGT 
    GCCCGCTGAG GGTGATCCTA ATCTTCCTCT CCGCCACCAT CGCCGGATTC 
    TTCCTCATCC GGGGCCTCAA CGCCGATCCC GACCTCCACG ACGATGCCGA 
    CGCCTCCGAA TCCCCAAGGG AAAGGCCCCC CGTGCCCCTC CATTCCAAGG 
    TTGGGTCGGC TTTGAAAACA GGATTCTGGA CGATGGTGGA CATGGCAAGT 
    GGGAAATACC TTTGGCGCAC TCTTGTTTCA CCACCAACAA AATGTGAATC 
    TGAGAAGGCC CAGTGATGGA GTTCTGATAT TTATATCATT GTTGATTTGG 
    GAATAGACGT AACCCCTATT GTGGTTAGAT TCTGTTCTTG AAGTGTAATA 
    TGATGGCAAC TGTAACATGA GGATTACATC TTGAAGTAAA TGTACAAATT 
    AGTTCACGTT TGAGCCTTTT CGTGTAACCT AAAACAATGA GTGGAGAATT 
    GTATTAATAC ATGAGATTTG GACTGAAGTT TCTGAATACA ATAGTTGGAC 
    ACTATTCTTT ATTTTCCTGT TG

    Gene models with high sequence identity

    1. AT5G58375.1 [+] show detail - Methyltransferase-related protein
      E-value: 6e-17; Score: 85.10

     

    InterPro Scan Digest

    See the detailed result >

    AT5G58375.1

    Model type
    Protein coding
    Short Description
    Methyltransferase-related protein
    Computational Description
    Methyltransferase-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G14602.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR