K35713

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K35713

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • decreased size (PATO:0000587)
    (Seed::Shape::small)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K35713

Determination of introduced cDNA(s)

  • J013058P11 - Rice Full-length cDNAs - Original: J013058P11

    full reading [+] show sequence

    Nucleotide sequence: J013058P11 - full reading 
    GGCGAGGAGA AACAGAGTTG GAGGCGATGG CGGCGGCGTC GGCGGCGAAG 
    GAGCTCCACT TCTTGCTGGT GCCGCTGGTG GCGCAGGGCC ACATCATCCC 
    TATGGTGGAC CTGGCGCGCC TCCTCGCCGG CCGCGGCGCG CGCGTCACGG 
    TGGTCACCAC GCCGGTCAAC GCCGCGCGCA ACAGGGCGGC CGTCGAGGGA 
    GCGCGGCGGG GAGGGCTCGC CGTCGAGCTC GCCGAGATCA CCTTCACCGG 
    CCCGGAGTTC GGCCTGCCGG AGGGCGTGGA GAACATGGAC CAGTTGGTGG 
    ACATCGCCAT GTACCTGGCT TTCTTCAAGG CCGTGTGGAA CATGGAGGCG 
    GCGCTCGAGG CGTACGTGCG CGCGCTGCCT CGCCGCCCGG ACTGCGTCGT 
    CGCCGACGCC TGCAACCCGT GGACGGCGGC CGTGTGCGAA CGCCTCGCCA 
    TCCCGCGCCT CGTGCTGCAC TGCCCCTCCG TCTACTTCCT CCTCGCCATC 
    CACTGCCTCG CCAAGCACGG CGTGTACGAC CGCGTCGCCG ACCAGCTCGA 
    GCCGTTCGAG GTGCCGGGCT TCCCCGTGCG CGCCGTCGTC AACACGGCCA 
    CGTGCCGCGG CTTCTTCCAG TGGCCCGGCG CGGAGAAGCT GGCGCGCGAC 
    GTGGTCGACG GCGAGGCCAC CGCTGACGGC CTGCTCCTCA ACACGTTCCG 
    CGACGTCGAG GGCGTCTTCG TGGACGCGTA CGCGTCGGCG CTCGGCCTGA 
    GGGCGTGGGC CATCGGGCCG ACGTGCGCCG CCAGGCTGGA CGACGCCGAC 
    TCCAGCGCCA GCCGTGGCAA CCGCGCCGTC GTCGACGCCG CCCGGATCGT 
    CTCGTGGCTC GACGCCCGGC CGCCGGCGTC CGTGCTGTAC GTCAGCTTCG 
    GCAGCCTCAC GCACCTCCGG GCGACGCAGG CGATCGAGCT CGCCCGCGGC 
    CTGGAGGAGT CGGGGTGGCC GTTCGTGTGG GCGATCAAGG AGGCGACGGC 
    CGCCGCCGTG AGCGAGTGGC TCGACGGCGA GGGGTACGAG GAGCGCGTCA 
    GCGACAGGGG CCTCCTGGTG CGCGGGTGGG CGCCGCAGGT GACCATCCTG 
    TCCCACCCGG CGGCGGGCGG GTTCCTGACC CACTGCGGCT GGAACGCGAC 
    GCTGGAGGCC ATCTCCCACG GCGTGCCGGC GCTGACGTGG CCCAACTTCT 
    CCGACCAGTT CAGCAGCGAG CAGCTGCTCG TCGACGTGCT CCGCGTCGGC 
    GTCAGGTCGG GCGTCACGGT GCCCCCCATG TTCCTCCCCG CCGAGGCCGA 
    GGGCGTGCAG CTCACCAGCG ACGGCGTGGT CAAGGCGGTG ACCGAGCTGA 
    TGGACGGCGG AGACGAGGGG ACGGCGAGGA GGGCGCGCGC CAAGGAGCTC 
    GCCGCGAAGG CGAGGGCGGC GATGGAGGAA GGCGGGTCGT CGCACGCCGG 
    CCTGACGGAC GTGATCGGAT ACGTCTCGGA GTTTTCGGCG AAGAAGCGGC 
    AGGAGAGGGA CGCCGGCGAG ACCGCCCAGC AGCCGCCGCC ATCTCCGGCG 
    GAGCTCGGAG ATATTAGCGG CGACAAGGTC GAAGCAGATC CTGCCTTGTC 
    AGTACAATCG TAGATAATAC AGTGTGTTAC TAGGTTACTA GATTGATGAT 
    GATGTAATTA GCGCACATTT AGGTTGTTAC ATTATTAATT AATCACGAAT 
    TCGAAAACAT GTATAAC

    Gene models with high sequence identity

    1. AT2G36750.1 [+] show detail - UDP-glucosyl transferase 73C1
      E-value: 6e-97; Score: 352.00

     

    InterPro Scan Digest

    Program Description E-value
    superfamily UDP-Glycosyltransferase/glycogen phosphorylas 2.2e-49
    HMMPfam UDP-glucuronosyl/UDP-glucosyltransferase 2.7e-20
    HMMPanther UDP-GLUCOSYLTRANSFERASE 1.8e-114
    HMMPanther UDP-glucuronosyl/UDP-glucosyltransferase 1.8e-114
    PatternScan UDP-glucuronosyl/UDP-glucosyltransferase 0
    Gene3D no description 1.3e-12

    See the detailed result >

    AT2G36750.1

    Model type
    Protein coding
    Short Description
    UDP-glucosyl transferase 73C1
    Computational Description
    UDP-glucosyl transferase 73C1 (UGT73C1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: don-glucosyltransferase 1 (TAIR:AT2G36800.1); Has 7705 Blast hits to 7611 proteins in 415 species: Archae - 0; Bacteria - 205; Metazoa - 2197; Fungi - 31; Plants - 5129; Viruses - 79; Other Eukaryotes - 64 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR