K35817

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K35817

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K35817

Determination of introduced cDNA(s)

  • J033023E01 - Rice Full-length cDNAs - Original: J033023E01

    full reading [+] show sequence

    Nucleotide sequence: J033023E01 - full reading 
    GTTGGCCGCT CTCTCCTCAC CGACGGCATC TCCAGCAGCA CGGGCATTCC 
    GGCGCCATGG GTCGGCGGCT GTTGCTGCTC TTCCTAATGC TGGCACAGGC 
    ACCCAATTCC AATGGGGATT CCAAGATAAA GAACGTGGTG GTGTTGGCGC 
    TGGAGAACCG GTCGTTCGAC CACATGCTGG GGTGGATGCA GCGGCTGCTG 
    GGCCTCCCCA TCGATGGCCT CACCGGCGCA GAGTGCAACC CGGCTCCAGG 
    ACCAGGTCCA GCCGACTCCC TCCTCCACTG CGTCTCCCCC GACGCCGACC 
    TCGTCGTCCC CGACGACCCC GCCCACGCCT TCGAGGACGT CCTCGAGCAG 
    CTGCTGGGGT TCCGACCCAA TGACTCTACT GGCGCCGCCG CCTCCCCCTC 
    AGACATGTCG GGCTTCGTCC GCAGCGCCGT CTCCGTGAGC GCGCTCCTGA 
    CCGACGCCGT CATGCGGGGG TTCACCCCGT CGCGGCTCCC GGCCTTCTCC 
    GCGCTGGCCT CCTCCTTCGC GGTGTTCGAC CGCTGGTTCT CCTCCATCCC 
    GGGGCCCACG CAGCCCAACC GGCTGTTCCT CTACTCCGCC ACCTCCCACG 
    GCGCCGTCGC CCACGGCAAG TGGAACCTCC TCCGCGGCTA CCCGCAGCGC 
    ACCATCTTTG ACTCCCTCGC CGCCGACGCC CTCGACTACC GGGTCTACTT 
    CAAGACCATC CCCACCACCC TCTTCTACCG CCGCCTCCGC ACCGTCGCCA 
    ACGCCGCCCG CGGCACCTTC CGCCGCTACG ACGCCGCCTT CCGCGACCAC 
    GCCCGCAGGG GCCTCCTCCC GGCGCTCTCC GTCATCGAGC CACGCTACTT 
    CGACCTCACC GGCACGCCCG CCGACGACGA CCACCCGGCG CACGACGTCG 
    CCAACGGCCA GAGGCTGGTC AAGGACGTCT ACGAGGCGCT GCGGGCGGGC 
    CCGCAGTGGA ACCACACACT GCTCATCATC ACCTACGACG AGCACGGCGG 
    CTTCTACGAC CACGTCCCGC CGCCCAATGT CGGCGTCCCC AGCCCCGACG 
    CCATCCGTGG CCCGCTGCCC TTCTTCTTCA GGTTCGACCG CCTCGGCGTC 
    AGGGTGCCCA CCATCATGGT GTCGCCGTGG ATCAGGAAAG GGACGGTGGT 
    GGGGAGGCCG CCGGGAGGGC CAACGCCCAC GTCCGAGTAC GAGCACTCCT 
    CCATCCCGGC CACCATCAAG AAGATATTCA ACCTCAGCTC CGACTTCCTC 
    ACCAGGAGGG ATGCGTGGGC GGGCACCTTC GAGCACCTCT TCACGGACCT 
    GGACGAGCCA AGGACGGATT GCCCGGAGAC ATTGCCGGAG ATCCCGCCGC 
    CATCTTCCTC GTCGTCGTCG ACCAAGAAAG AAGACGGAGG ATGGCTGTCG 
    GACTTCCAGC GCGAGCTGGT GCAGCTGGCG GCCTTCCTCA ACGGCGACTA 
    CATGCTGTCA AGCTTCGCAC AGGAGTACGA GTCGAGAATG ACGATGACGG 
    TGAAGCAGGC GGATGCGTAT GTGAGGCGAG CCGTCAAAAG TTTCCTGGAG 
    GCCAGCAAGC GGGCCAAACG CTTAGGTGCA AACGACTCCG CCATTGTAAC 
    CATGAGACCA TCCCTCACTA CTGCAACCAC CTGCTGCCCT TAGTTACCTA 
    CTGTAGTACA CTAAACTAGT CTCTTTATTA ATTTAATTAA TTACCTACCT 
    TAGCT

    Gene models with high sequence identity

    1. AT3G48610.1 [+] show detail - non-specific phospholipase C6
      E-value: 3e-137; Score: 485.00

     

    InterPro Scan Digest

    See the detailed result >

    AT3G48610.1

    Model type
    Protein coding
    Short Description
    non-specific phospholipase C6
    Computational Description
    non-specific phospholipase C6 (NPC6); FUNCTIONS IN: hydrolase activity, acting on ester bonds; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoesterase (InterPro:IPR007312); BEST Arabidopsis thaliana protein match is: non-specific phospholipase C1 (TAIR:AT1G07230.1); Has 2244 Blast hits to 2129 proteins in 399 species: Archae - 32; Bacteria - 1880; Metazoa - 0; Fungi - 127; Plants - 152; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR