K36305

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	increased length (PATO:0000573) (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K36305

Determination of introduced cDNA(s)

J023019C12 - Rice Full-length cDNAs - Original: J023019C12

full reading [+] show sequence

GTCACGCGAC GACCTCGCCG TCGCCGTCGC CGCCGCCGCC GCCGCCATGG 
GGAGGCGATC CGGGGGGAGG AAGCTGCCCT TCTTCGCCTC GAACGCCTCC 
ACGTCGTCCT CCACCAAGCG GACCCGCTCG GCGCGCCGCC TCCCCTCGCT 
CACCAGGCCG CGCGCGTCGA GCTCCCCATC CCCGGCGTCG CCGTCCCCGC 
CGCCGCCGTC CGCGTCGCAC CCCGCCCCTC CGTCCCCTCC CCTCGCCGTA 
TCTCCCGCCG GCGCCGGTAA GGTCGGGAAG AAGAAGGCCG GGGCGCGCCT 
CTGGATGCGG CTCGACCGGT GGGGCGTCTC CGAAACCCTC CATCTCGACA 
AGGGCTCCAT CATCCGACGC GCCGGCCTGC CGCCGCGGGA CCTCCGGATC 
CTCGGCCCCG TCTTCTCCGA CTCCTCCAGC ATCCTCGGTG AGCTCGACCA 
CGCCCCCATT AGTATCGATT GCTGCTTAGG GGGTCGCTTT TGTTGTGACA 
ATACACAATG TTTAATTGTG CAGCTAGAGA GAAGGCGATG GTGATCAACC 
TAGAATTCAT CAGGGCGATC GTTACGGCCG ATGAGATCCT TCTACTGGAT 
CCTCTCACGA TCGATGTGAT CCCTTTTGTT GAGCAATTGA CACATCATCT 
CCCTCTCAAG AACCTGGTGT GTGGGAATGG TCAACCTGGT GGTGATGACC 
ATGGGGAAAA GCATGATGAC TCGCATGGAG ATCAGGTGCC CCGCCTTAAC 
GAGGCCACCG GAGCAGAGCA CGAGTTGCCA TTTGAATTCC AGGTGCTGGA 
GCTCGCACTC GAGACCGTGT GCTCATCATT CGACGTTAAC GTGTCTGGTC 
TTGAAAGGCG CGCCACTCCG GTACTTGAGG AACTGACCAA GAATGTCAGC 
ACAAGGAATC TCGATCGTGT GCGAACTCTC AAGAGTGATC TTACCCGTTT 
GCTTGCCCAT GTGCAGAAGG TCAGAGATGA AATAGAACAT CTTCTGGATG 
ATAATGAAGA CATGGCACAT CTGTATCTAA CAAGGAAGCA ATTACAAAAC 
CAGCAAGTTG AGGCTTTAAT ATCATCGGCT GCTTCCAATA GCATTGTTCC 
TGGAGGAACA AGTCTGTCCA GGTTGAACAA TAGTTTTCGG CGCAGCGTGA 
GCATCGCTAC AAGCATGCAT TTGGATAATG ACGTGGAAGA CCTAGAAATG 
TTGCTTGAGG CTTACTTCAT GCAATTGGAT GGAATTCGCA ACAGAATTTT 
GTCGGTTCGA GAGTATATTG ATGATACAGA AGACTATGTC AATATTCAAC 
TTGACAACCA GCGTAATGAA CTTATTCAGC TTCAGCTTAC ACTGACTATT 
GCATCCTTCG GCATAGCTGT CAACACCTTC ATAGCTGGGG CTTTTGCGAT 
GAACATCCAG AGCAAATTGT ACAGCATTGA TGATGGTAGC TTCTTTTGGC 
CATTTGTTGG GGGCACCTCA TCGGGCTGCT TCATGATCTG CATCGTCTTA 
TTATGGTATG CCCGGTGGAA GAAGTTGCTC GGTCCTTGAA CACAATGTAA 
CAAGTCACGA CTCATGAGAA CTGTCTCGCT GTAAAGGGCA TGCATTTTGA 
CTTGTAACGT CTGCAGAAAG GAGCAGTCAT TTGAAACATA AAAGAGAATC 
CTAGGATTAG GGAGAAACTC TAATGCATTT ATGTTTCACT GGTAAATAAG 
ATACATTTTC TGTT

Gene models with high sequence identity

AT3G58970.1 [+] show detail - magnesium transporter 6
E-value: 8e-112; Score: 65.50

InterPro Scan Digest

Program	Description	E-value
HMMPanther	RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL	1.4e-07
HMMPanther	RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL	2e-92
Coil	coiled-coil	0
HMMPfam	Mg2+ transporter protein, CorA-like	2.1e-07

See the detailed result >

AT3G58970.1

Model type: Protein coding
Short Description: magnesium transporter 6
Curator Summary: Transmembrane magnesium transporter. One of nine family members.
Computational Description: magnesium transporter 6 (MGT6); FUNCTIONS IN: magnesium ion transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: transmembrane transport, metal ion transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mg2+ transporter protein, CorA-like (InterPro:IPR002523); BEST Arabidopsis thaliana protein match is: magnesium transport 5 (TAIR:AT4G28580.1); Has 803 Blast hits to 784 proteins in 174 species: Archae - 2; Bacteria - 26; Metazoa - 66; Fungi - 194; Plants - 407; Viruses - 2; Other Eukaryotes - 106 (source: NCBI BLink).
Link: InterPro Scan - TAIR