K36520

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K36520

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K36520

Determination of introduced cDNA(s)

  • J033125K21 - Rice Full-length cDNAs - Original: J033125K21

    full reading [+] show sequence

    Nucleotide sequence: J033125K21 - full reading 
    GAGCGCCGCC ACCGAGCGGC TCGCGCCGCC GCCGCCGCCG CCGCCACCCC 
    TCGCGCCGCC ATCTCCACCA TCGCCGTCGC CGTCGCCTCG CCTCGTCACG 
    GCCGCCTCCG CCATCGCCTC CGCCACCTCC ACCATCGTCG TCGTCGTCGT 
    CGTCGCCACC CCTCTCCCAC CATCGTCTCC GCCATCGTTG TCGCCGTCGC 
    CTCGCGCCAC CACGGTCGCT GCCGCCTCCG ACTTCCCCGT CGCCTCGCGT 
    CGTCGTCGCC GTCGCCCGCC CCCGCCACCA TCTCCGGCCC CCCAAACCCT 
    AGCCGCCGCC GCCCGCTCGT TCCGACGGGG ATTCGGAGGG GGTCGAAGGG 
    AGGAAGAGGC GGTGGCGGTC GGCGAAGAGG ACGACGATGG CGACGGCGGC 
    AGCGGCGGAG GAGGCAGACG CGGCGGTGGG AGATGGAGAC GGTGGTGATG 
    GCGGTCGGCG AAGAGGACGA CGATGGTGAC GGCGGCGGCG GAGGAGGAGG 
    CGGATGTGGC GGCGGAGAGC GAGACGGTGG TGATGGCGAC GACCCCCGCA 
    CTCTCTCATG GCAATCTCGG GGGAGGTGTC GGGGACCACG GCAACGCTGG 
    TGGTCATCAA TGGATTCACG GTCACGGTGG AGTCAGTCGG GGACTCGCGG 
    TGCATCCTGG ACACGCAGGG TGGTGAGGTG CAGTTGCTGA CCGTCGACAA 
    CTGCCTGGAG AAGAATGCCG AGGAGCGGGA GCGGGTTAGC GCCAGTGGTG 
    GGGAGGTCGG CCGGCTCAAT CTCTTCGGTG GTCAGGAGTT CTAGGTTGGC 
    CCTCTCCGGT GCTAGACAGG TGGCATGTGC CTTTCAAGAT CTATTGGGGA 
    CCTCTTCCTG CCGCTCCCAT CATCCCTCGT TGCCCGCCCC ACATCCCATC 
    ATCGACGGCG GCGTGGATTT TGGTGGTCGC GCAGGTCTGG CTGACGAGCT 
    CCATGGCGGC TCGAAGCAGA TGGCGACCTC AACGGCAACG TGGATCCAGG 
    CTAGAGCTTG ATAATGGCAC TAATCTGCCA ACGAGCTTGG CGGCAACATG 
    CCCGGCGGCC GCCGTTAGTT CCTTACCCAG CGCCGTCTCC ACCGTCTTCG 
    CTGCCTCCAC GGTCATGGCC AGCGGCGGTT GACCATGGCA TATGCTCCGG 
    CAGGCAAAAG CAGAGAGATG GCCTTCCTCC CCTTTCTCTC CCATCTCTCC 
    TTAGATTAAT CTTTCTCTCT CTCAGGCTGC CATTGTTGTT CTTTTCATGG 
    ATAAAATTGT TAGGGATCGG CAATATTTCC TATTCTAATT GTGTCTTGAC 
    TGAAAATTAG TTCGATT

    Gene models with high sequence identity

    1. AT1G09160.2 [+] show detail - Protein phosphatase 2C family protein
      E-value: 2e-34; Score: 143.00

     

    InterPro Scan Digest

    Program Description E-value
    superfamily Protein phosphatase 2C-related 7.6e-09
    HMMPanther PROTEIN PHOSPHATASE, PLANT 3e-26
    HMMPanther Protein phosphatase 2C 3e-26
    HMMPfam Protein phosphatase 2C, N-terminal 3.4e-12
    Gene3D Protein phosphatase 2C-related 4.3e-05

    See the detailed result >

    AT1G09160.2

    Model type
    Protein coding
    Short Description
    Protein phosphatase 2C family protein
    Computational Description
    Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G68410.2); Has 5570 Blast hits to 5569 proteins in 486 species: Archae - 4; Bacteria - 416; Metazoa - 1194; Fungi - 467; Plants - 2390; Viruses - 7; Other Eukaryotes - 1092 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR