K36707

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K36707

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Original: K36707

Determination of introduced cDNA(s)

  • J013099D01 - Rice Full-length cDNAs - Original: J013099D01

    full reading [+] show sequence

    Nucleotide sequence: J013099D01 - full reading 
    GAGTAGTGGC GCTACCTCTT TCTTCTCTCT ATCTCTCAAC GAGCGCGGCG 
    CGAGCAAGAG GAGCGCGCAC CCCGGCGACA TCAGAGCTCG TCGACGCCGG 
    GGACTCTGCG CGGCGGCTAG GGAGTTCGCC CGCCGGAGCA AGGGCTGGGC 
    GGGACAAAGA GAAGAAATCT GCAGCGAACC CATGGCGATT CTGCCCCTCT 
    CGATTTCCCA CTCTCTTACC TCCGCCTTGT CCGCCACCTC CTCCGGCATC 
    GGCAGGCCAG TTGCCCGCCT CCTCCACCCG CGGGTCCCCT CCCGTCCCAC 
    CGTCATCTGC CTCGCCGCGC CGCCCAAGGT ACCCGTCCCC ATCGCCTCAC 
    CGGCTTCACT AGGGGACGAC CCTTCCAAAT GGGACCCGGC CGAGTGCGAC 
    GCCCTTCTCC GCGGCGGCGA GCAGGTCGCC TCCGTGCTCC AGGAGATGCT 
    CAAGCTGATG GAAGACATGG AGATGGATGG CTCGTTTGAA TCATTGGCTG 
    TGGAGTTGAT CGCTCAAGGA GTCATTGGGA AAAGAGTTGA TGAGATGGAA 
    TCTGGCTTTC TAATGGCACT TGATTACATG ATACAGCTTG CTGAGAAGGA 
    TAGTGACAAT GAGCGTAAAT CTCTCCTTGA GGTAGTCAAG CAGACAGTGC 
    TGGATCATCT CACAAAAAAA TGCCCTCCAC ATGTTCAAGT GGTTGGACTT 
    CTTTGCCAGA CTGAAAAGAA GGATAGCAGA CATGAATTAC TGCGTCGTGT 
    AGCTGCTGGT GGAGGTGTGT TTAAAAATGA TAAAGGCCTT AAGTGCCAGA 
    TTCCAGGGGC CAATCTTAAT GATATTGCAA ACCAGGCAGA TGATCTCTTG 
    GAGTCAATGG AATCAAGGCC CACAATTCCT GATCGAAAAC TTCTCGCTAG 
    ACTAGTTATC GTAAGAGAGG AGGCTCGAAA TATGATGGGA GGTGGCCTGT 
    TAGATGAAAG AAATGACCGT GGTTTCACAA CGCTTCCTGA GGCAGAGGTG 
    AACTTCTTGA GCAAGCTGGT TGCTCTCAAA CCTGGGAAAG CATTGGAGAG 
    GATGATCAAG GATGTTATGC AGGGCAAGGC AGAAGGTGCT GATAACATTG 
    AAAATGCAAA TGCTGGACCA GATTCTAAGC TTAATCATCT AACTGGGATA 
    TCTGGAAGGG GAAGTGTGAC AGGCCTCAAG CCACGGCCAG TCCGTCCAGG 
    AATGTTCCTT GAGACGGTTT CTAAGGTTCT AGGTGGTATA TATGCAAACA 
    ACACATCTGG CATTACAGCA CAACATCTAG AATGGGTACA TCAAACAACA 
    CTGAAGATTC TTCAGGAAAT GGCCTTCTAA TGCTGTTTTC TGGACGACAT 
    TCACTGCCCT GTTCAAGTAT ATGAACTCCC TAGATTCTTG GCCCTTTTAA 
    GCTTATGATA TTACAGCCTA GTGGGCAAAA GGATCATGGT ATGGACCTTA 
    GTCTTGCTGC AAAAACTTAT TGATTTTTTT TTACCAGTGA ATGGCAAATC 
    TTGGAGGAAC TTGAGTGGCC ATTACTAATA TAGTTAAAAA TAGAAGCAGA 
    AGAAATGATG TCTGGGCATG CAAAGGCCAA TGGTGATCTC TGGGTGGAAT 
    GTAATATTTA TACCACATTT AGTGCAGAAG TAAAGTAAGA GCTTCG

    Gene models with high sequence identity

    1. AT5G48470.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 2e-128; Score: 456.00

     

    InterPro Scan Digest

    See the detailed result >

    AT5G48470.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR