K36809

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	increased length (PATO:0000573) (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K36809

Determination of introduced cDNA(s)

J013000E09 - Rice Full-length cDNAs - Original: J013000E09

full reading [+] show sequence

GATTTTAGAA CAGACTGAAT CATCAACGGA CCAGGGAAGC ATGGCCTTGA 
AGCTTCTCTG GCTGCATGCC GACGGACACT GCCAGTGCCA CCTCTCTCTG 
CTGCTGCGCC TCGTCGCTTG CCTCGCCCTT GTGCTGCTGC TGCCGCCGCC 
GCCGCCTGCC CAAGCGGCGA CGGTGGTCAC CCACCTGCCG GGATTCGATG 
GTCCTCTACC CTTCTACCTG GAGACCGGGT ACGTGGGCGT GGAGGAGGAG 
ACCGGGACGG AGCTCTTCTA CTACTTCGTG GAGTCGGAGC GGAGCCCTCG 
CAGCGACGTC GTGCTGCTGT GGCTGTCGGG AGGGCCGCGG TGCTCGGTCT 
TCAGCGGCTT CGTGTACGAA ATAGGCCCTG TAATGTTTGT CGCGGAACGT 
TACAGCGGCG GCACGGTTCC GCGGTTGGAG TATAATCCGT ATTCCTGGAC 
GAAGTTGGCA AGCATTCTCT TCGTGGACTC GCCCGTTGGT TCCGGTTTTT 
CATATGCGCA CGATCCCAAA GGTTATGATG TTGGAGACAT ATCATCTTCT 
ATGCAAATTG TGAAATTTCT ACGAAAGTGG CTGGATGATC ATCCAAAGTA 
CCTTTCCAAT CCGTTCTATA TTGGAGGGGA TTCATACGCC GGAAAGGTGG 
TTCCTCTTAT CACACAGTAT CTCTCTGAAG GAATTGAAGA AATGCGTCAT 
CCAATCATTA ATTTAAAGGG TTATCTAGTC GGCAATCCTA GTGCAGGAGA 
TAAGATTGAT GTGAACTCTA GGGTTCCATA CTCTCATTCA TTTGGAGTGA 
TATCTGACCA ATTGTATGAG GCTGCCCTGG CAAATTGTAA AGGGGATTAT 
GAAAACCCAA CGAACAAACC ATGCACTGAC GTAATGCAGA CCATTAACAA 
TCTCATGTCA GAAGTATTGG AACCAGCATG TCCCTTTGAC TGGCCATGGC 
CAATGCCAGG AAGAGATGCT TCCAATAGGA AGTCTCTAAC CGAGGAGCAC 
TATTGGTTAG GTGACCCACC TGTTGAACCT CCTTTCAGTT GTTTTGCTGC 
ATACCGATAC TACCTGTCTT ACTTCTGGGC AAACGACAAT GCCACCAGAG 
CTGCTCTCGG GATAAAGGAG GGAACGGTGA CGGAATGGAT AAGGTGCCCT 
ACGGGTCTTC CTTACACACG TGATCTTCCA AGCAGCATAG AATGCCATTT 
CAACGTCACC ACCAGGGGTT ACCGTGCTCT TGTGTACAGC GGAGACCACG 
ACCCTATTGT GCCATTCTCA GGCACGCAGG CATGGATAAG ATCATTAAAC 
TTTTCCATTG TTGATGATTG GAGAGCATGG CACCTTGATG GCCAGGCTGC 
AGGGTTAAAT TCACAATCAA GTATGCTAAC AACCTGACCT TTGCGACAAT 
AAAGGGTGGT TGCCATATTC CTCCCGAAAA TCGGCCCAAG GAATCCTTCA 
TTATGGCAAA ACGGTGGCTG GCTGGTGGAC CCCTCTAATG TGCCGTCGCG 
CACAATACGG CATCTCTGAA TTCAGATTCC GATCATCATC AACATATGTA 
ATGTGCTCAT TATATTGAGT AAATCAATAT AACTAGCTGG ATGGCCCGTG 
CAATTGCGCG GCTAGCACCC AAACAAAATT ATATATTTTT TATATGATTT 
TACTTAAAAT TTATTAGATA GCC

Gene models with high sequence identity

AT3G12203.1 [+] show detail - serine carboxypeptidase-like 17
E-value: 1e-102; Score: 51.60

InterPro Scan Digest

Program	Description	E-value
superfamily	alpha/beta-Hydrolases	2.3e-104
HMMPfam	Peptidase S10, serine carboxypeptidase	3.6e-94
HMMPanther	SERINE CARBOXYPEPTIDASE I (PLANTS)	2.8e-173
HMMPanther	Peptidase S10, serine carboxypeptidase	2.8e-173
Gene3D	no description	4.1e-98
FPrintScan	Peptidase S10, serine carboxypeptidase	6.7e-17
FPrintScan	Peptidase S10, serine carboxypeptidase	6.7e-17
FPrintScan	Peptidase S10, serine carboxypeptidase	6.7e-17

See the detailed result >

AT3G12203.1

Model type: Protein coding
Short Description: serine carboxypeptidase-like 17
Computational Description: serine carboxypeptidase-like 17 (scpl17); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 16 (TAIR:AT3G12220.1); Has 3617 Blast hits to 3541 proteins in 365 species: Archae - 0; Bacteria - 182; Metazoa - 630; Fungi - 840; Plants - 1564; Viruses - 0; Other Eukaryotes - 401 (source: NCBI BLink).
Link: InterPro Scan - TAIR