K37107

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K37107

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K37107

Determination of introduced cDNA(s)

J013030N19 - Rice Full-length cDNAs - Original: J013030N19

full reading [+] show sequence

GAGTATTAAG GCTCCTTCTG TGTCAAAGAA TCAGCCATCA AACCATTTTC 
TCATTGCAGA CATCTCTGCC TGCTGCCTCC TCTTCTTGGT GTTCTGGGTC 
AGACAGAGAA AGCTGAGTTG TTCTTTAGGA ATTGGGTATT ATTTTTTTTG 
AAAGCGCGGA ATTGGGTATT ATGGGTAACT GCTGGTTTAA AGGGAATCCA 
TACTTTAACA GGGTTTCTTC CAATGCAACA AAATCAGAAT CACCTAAAAT 
GCAGAGCCCA TCTGAGAGAA AAGAAAAGGA TGACAGCATG CTGCCGTCGA 
ACGCGAAAGA GGTGGAGGAA CTGAGAAGGG AGTCGGCTCG GAACCCTCTG 
ATAGCATTCA CATTTGAGGA GCTCAAGAGG ATAACAAAAA ATTTCAGGCA 
GGATTCATTA CTAGGGGGAG GTGGATTTGG TAGAGTCTAC AAAGGATACA 
TCACCAGTGA TCTTCGCGAA GGATTAACAA TAGAGGAGCC ACTGCGAGTC 
GCAGTGAAGG TCCATGATGG AGACAATAGT TTCCAGGGGC ATAGAGAGTG 
GCTGGCTGAG GTCATATTTC TTGGGCAGCT CTCTCACCCA AATTTAGTGA 
AGTTGATCGG GTATTGTTGT GAAGATGACC ACAGAGTACT TGTTTATGAG 
TTCATGCCCC TGGGAAGTGT GGAATCACAC CTGTTTTCGA GGGTAATGGT 
ACCACTCCCA TGGTTCACCA GAATGAAAAT TGCACTAGGT GCAGCAAAAG 
GACTTGCTTT TCTTCATGAA GCTGAGAAGC CAGTCATTTA TCGGGATTTC 
AAGACATCAA ATATATTACT TGATGAGGAA TACAATGCGA AGCTCTCTGA 
CTTTGGGCTC GCAAAAGATG GACCAGTCGG CGACAAATCA CATGTTTCAA 
CACGAATCAT GGGAACCTAC GGTTATGCAG CCCCGGAGTA CATCATGACA 
GGGCATCTGA CAGCGATGAG CGACGTATAC AGCTACGGGG TCGTGCTCCT 
TGAGCTCTTG ACAGGGCGCA AATCATTGGA CAAGTCCAGG CCAGTCAGGG 
AGCAGACATT GGCAGACTGG GCATTCCCAA TGCTGATACA GAAGAAGAAG 
GTTCTTGGCA TAGTAGACCC CAGGCTCGCC GAGGACTACC CGGTGAAGGC 
AGTCCAGAAG ACGGCGATGC TGGCCTACCA TTGCCTCAAC CGCAACCCCA 
AGGCTAGGCC GTTGATGCGC GACATTGTCG CCACCTTGGA GCCTCTTCAG 
CAGATGGAGG AGGATCCCAG TATCAGTTTG GTTAGTGGCA CTGAAGTGTG 
AGAGCTTCAT CTTGTTCAGA CTTCAGAGAA ACAAAGATGC CATATCACCA 
TATGTTTGAT CATAGTAGCT AATTGAGTGC TTGGTCTGTA TATAGTAGGT 
AATTGAGTTT TGCTAAGAAG GTATATGTAA TATAGTATCA TTTTAGGTTT 
GTTTGTGTAT CTAATGTTTG ACATGGGAAG TGGTTTTTTA CCCTTCGAGG 
GG

Gene models with high sequence identity

AT5G56460.1 [+] show detail - Protein kinase superfamily protein
E-value: 5e-158; Score: 554.00

InterPro Scan Digest

Program	Description	E-value
superfamily	Protein kinase-like domain	9.7e-78
HMMPanther	SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE	2.3e-160
ProfileScan	Protein kinase, catalytic domain	36.16
PatternScan	Protein kinase, ATP binding site	0
PatternScan	Serine/threonine-protein kinase, active site	0
Gene3D	no description	1.9e-21
Gene3D	no description	9.3e-51
HMMPfam	Serine-threonine/tyrosine-protein kinase	5.3e-45
HMMSmart	Serine/threonine-protein kinase domain	6e-32
HMMSmart	Tyrosine-protein kinase, catalytic domain	6.1e-28

See the detailed result >

AT5G56460.1

Model type: Protein coding
Short Description: Protein kinase superfamily protein
Computational Description: Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G01020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR