K37111

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K37111

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K37111

Determination of introduced cDNA(s)

  • J033048H19 - Rice Full-length cDNAs - Original: J033048H19

    full reading [+] show sequence

    Nucleotide sequence: J033048H19 - full reading 
    GGGGTGGGCC CTCACTTCCT CCGCCGAAAG CCACGCACAC GCTGCCCATA 
    AAAAGGCGAC GCTGTTCTCA AAACCTCAGA AAATTCCTAT ATCCTCTGTT 
    CGTCACTGCC TTCCTCTCCA AGTCCATCCC CTTCCCCGAT CTAAGATCCA 
    TCCGATCCAG GCCATGGCGG CGACCATCCA GAGCGTGAAG GCCCGCCAGA 
    TCTTCGACAG CCGTGGCAAC CCCACCGTCG AGGTTGATAT TTGCTGCTCG 
    GATGGAACAT TTGCGAGGGC TGCTGTGCCT AGCGGTGCAT CTACTGGTGT 
    ATATGAAGCT TTGGAATTGA GGGATGGTGG CTCTGATTAC TTGGGAAAGG 
    GTGTCCTCAA GGCTGTTGAC AATGTGAACT CTATTATTGG ACCAGCATTG 
    ATTGGCAAGG ACCCTACAGA ACAGACTGTC ATTGACAACT TCATGGTTCA 
    GCAACTGGAT GGAACCAAAA ACGAGTGGGG CTGGTGCAAG CAAAAGCTTG 
    GTGCTAATGC TATCCTGGCT GTCTCACTTG CTCTATGCAA AGCCGGAGCT 
    ATTATCAAGA AAATTCCGTT GTATCAACAC ATTGCTAACC TTGCTGGTAA 
    CAAGCAACTT GTTTTGCCTG TGCCTGCTTT CAATGTCATC AATGGTGGAT 
    CACATGCTGG AAACAAGCTA GCTATGCAGG AGTTCATGAT CCTCCCTACT 
    GGTGCTTCAT CTTTCAAGGA GGCTATGAAG ATGGGTGTTG AAGTATACCA 
    TAACTTAAAG TCTGTTATCA AGAAGAAGTA TGGGCAAGAT GCTACTAATG 
    TTGGTGATGA AGGTGGTTTT GCTCCAAACA TTCAGGAAAA CAAGGAGGGC 
    CTTGAGCTTT TGAAGACTGC AATTGAAAAG GCTGGATACA CTGGCAAGGT 
    TGTCATTGGG ATGGATGTTG CTGCTTCAGA GTTCTACACT GAGGACCAAA 
    CCTATGATCT TAACTTCAAG GAAGAGAACA ATGATGGTTC CCAGAAGATA 
    TCTGGAGATA GCCTGAAGAA TGTGTACAAG TCATTTGTTA GTGAATACCC 
    AATTGTCTCG ATCGAAGACC CATTTGATCA GGATGACTGG GTTCACTATG 
    CTAAGATGAC CGAAGAAATT GGAGATCAAG TGCAGATTGT TGGAGATGAT 
    CTCCTTGTCA CCAACCCAAC TAGGGTAGCC AAGGCAATTA AGGACAAGGC 
    CTGCAATGCT CTTCTCCTTA AGGTTAACCA AATTGGATCT GTTACTGAGA 
    GCATTGAGGC TGTCAAGATG TCAAAACGTG CTGGCTGGGG TGTGATGACC 
    AGTCACAGGA GTGGTGAAAC TGAGGATACA TTCATTGCTG ATCTGGCAGT 
    TGGTTTATCC ACGGGCCAGA TCAAGACTGG AGCTCCTTGC AGATCTGAGC 
    GCCTTGCCAA GTACAACCAG CTTCTTAGGA TCGAGGAGGA GCTTGGTGCT 
    GCTGCCGTCT ATGCCGGAGC CAAATTCCGT GCACCAGTGG AGCCCTACTA 
    GATGGGAATA GAACCACTTC GTTTCCGTAA ATTTTGTGAA GATTGTGAGG 
    GTTTGAGCAA TAATTCCCCA CGGTCAGATG TGGGTGGACA TGCTCCCACA 
    AAACGCTTAA TTTTGATGTT GCGTGGCGCA AGCGTGATTT GAAGGAACAC 
    AAATGATTAT ATTAAACGTT ATAAGCAAAG TTCAACACC

    Gene models with high sequence identity

    1. AT2G36530.1 [+] show detail - Enolase
      E-value: 0; Score: 784.00

     

    InterPro Scan Digest

    Program Description E-value
    PatternScan Enolase, conserved site 0
    Gene3D no description 6.9e-43
    Gene3D no description 1.3e-138
    FPrintScan Enolase 1.2e-51
    FPrintScan Enolase 1.2e-51
    FPrintScan Enolase 1.2e-51
    FPrintScan Enolase 1.2e-51
    FPrintScan Enolase 1.2e-51
    FPrintScan Enolase 1.2e-51
    HMMPfam Enolase, C-terminal 1.6e-161
    HMMPfam Enolase, N-terminal 3.5e-54
    HMMTigr Enolase 6.2e-239
    ProfileScan PROKAR_LIPOPROTEIN 5
    HMMPanther ENOLASE 2.2e-124
    superfamily Enolase C-terminal domain-like 1.9e-128
    superfamily Enolase N-terminal domain-like 7e-52
    HAMAP Enolase 41.894

    See the detailed result >

    AT2G36530.1

    Model type
    Protein coding
    Short Description
    Enolase
    Curator Summary
    Involved in light-dependent cold tolerance and encodes an enolase. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.
    Computational Description
    LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2 (LOS2); FUNCTIONS IN: phosphopyruvate hydratase activity, copper ion binding; INVOLVED IN: response to cadmium ion, response to salt stress, response to cold, response to light stimulus, response to abscisic acid stimulus; LOCATED IN: in 8 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Enolase (InterPro:IPR000941), Enolase, C-terminal (InterPro:IPR020810), Enolase, conserved site (InterPro:IPR020809), Enolase, N-terminal (InterPro:IPR020811); BEST Arabidopsis thaliana protein match is: enolase 1 (TAIR:AT1G74030.1); Has 13396 Blast hits to 13370 proteins in 3710 species: Archae - 270; Bacteria - 5735; Metazoa - 2292; Fungi - 281; Plants - 265; Viruses - 0; Other Eukaryotes - 4553 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR