K37148

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K37148

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K37148

Determination of introduced cDNA(s)

  • J033071M08 - Rice Full-length cDNAs - Original: J033071M08

    full reading [+] show sequence

    Nucleotide sequence: J033071M08 - full reading 
    GGGAGCCAGC AGCAAAAGCC CATTATTAAC GGGACGCACG CGCGCGCGCG 
    CAGGGGACAA GTCGAGGGAG AGCTAGCTAG CTTAGCTTGC TTGGTTGCTT 
    TGGAGGTGTG GCTTGCCATG GCGAGAGCGT TCCGCGCGGC CTCGCCGCTG 
    CCGCTGCCGT CCTCCAGCTC CAGGGCGGCC GCGGCGAGCG GTGGCACCGG 
    CGGAGGCGGA GGCGGGAACT TCCCGTGGCT GAGCAGGAAG CGGCTGGGCG 
    CCAAGCCGCC GTCGCCGCAG CGGCGAGGTG GACAGGAGAG GGAGGGAGGT 
    GGAGATGAGG CGGCGGGGAT GGGGACGACG ACGGGCCGCG CGGTTCTCCG 
    CGACGTCGTC CGCGGAGCCT GCTGAGGTGC AGTCGTCGTC GTCGTCGAGG 
    AAGCGCGCGG ACGCGCTGGC GAGGCTGCGG GCGGCGTTCC TGGCGGCGAT 
    CACGCACCGG CGGCGGCGGC GGCAGCTGGG GTCGAGCCTG ACGGGCACCA 
    TCTTCGGGCG GCGCCGCGGC CGCGTTCACG TCGCGCTGCA GACGGACACC 
    CGCTCGCCGC CGGTGCTGCT GGTGGAGATG GCCGCCTACT CCACCGGCGC 
    GCTCGTCAGG GAGATGTCCT CCGGCCTCGT CCGCCTCGCG CTCGAGTGCG 
    AGAAGCAACC AATCAACCCA GGCGAGAAGC GGCGGGCGCT GCTGGAGGAG 
    CCGACGTGGC GGGCCTACTG CAACGGCCGA AAGTGCGGCT TCGCGGTGCG 
    CAGGGAGTGC GGCGCCGACG AGTGGAGGGT TCTTGGCGCC GTCGAGCCGG 
    TGTCCGTCGG CGCCGGCGTT CTCCCCGACG ACGCCGCCGC CGCCGCCGCC 
    GCCGAGGAGG GCGACCTGAT GTACATGCGC GCGAGGTTCG AGCGGGTGGT 
    CGGGTCGAGG GACTCGGAGG CGTTCTACAT GATGAACCCT GACGGCAGCG 
    GAGGCCCGGA GCTCAGCATC TACCTGCTCA GAGTCTGACC ATGGATCATA 
    CTATCATGGA GCAAAATCGA AAAGAAAAAA TGAGAGAAGA AATCATCTTG 
    ATGTTTGCAA TTAATTGTAC GTAATCCATC CATCCATGCA TGCATAGTTT 
    GGCTTGTGTT AATTACTTTC TTGGGTTTCA TGTAATTTGA AGGGTGTCAA 
    GGTGTGTACA GTATTACTGA TCACTTGGGG GGGGCTTAAT ATATCAATCT 
    GGTAAACATT GGTGTGATGC

    Gene models with high sequence identity

    1. AT5G23100.1 [+] show detail - Protein of unknown function, DUF617
      E-value: 2e-51; Score: 199.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Protein of unknown function DUF617, plant 6.6e-74
    HMMTigr Protein of unknown function DUF617, plant 1.5e-86

    See the detailed result >

    AT5G23100.1

    Model type
    Protein coding
    Short Description
    Protein of unknown function, DUF617
    Computational Description
    Protein of unknown function, DUF617; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF617, plant (InterPro:IPR006460); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF617 (TAIR:AT3G25640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR