K37336

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K37336

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K37336

Determination of introduced cDNA(s)

  • J013120F13 - Rice Full-length cDNAs - Original: J013120F13

    full reading [+] show sequence

    Nucleotide sequence: J013120F13 - full reading 
    GGTGCGCCTC CTGAATCAAG TAGAAATAGT ACTACTACGC AAGTAACGTA 
    GATCAGCACG TAGATAGCTT GCGAAGACGT TCTGAAAGAG TGCAGAGAGT 
    TTTTGCTAGC TCTCGGTGGT GATATCCATG GCTAACGCGG GGCTGAAGCC 
    GGTGGCCGGC CTTCTCCTGG TTCTCAACTT CTGCATGTAC GTCATCGTGG 
    CGGCGGTCGG CGGCTGGGCC ATCAACCACG CCATCCACAC CGGCTACTTC 
    ATCGGTTCCG GGATGGCGCT GCCGGCGAAC TTCTCCCCGA TCTACTTCCC 
    GATGGGGAAC GCGGCGACCG GGTTCTTCGT CATCTTCGCG GTGATCGCCG 
    GAGTCGTCGG CGCCGCGGCG GCGCTCGCTG GGTTCCACCA CGTCCGCGCG 
    TGGAGCCACG AGAGCTTGCC GGCGGCGGCC TCCTCCGGGT TCATCGCATG 
    GACGCTCACC CTGCTCGCCA TGGGATTGGC CGTCAAGGAG ATTGACCTGC 
    ACGGCAGGAA CGCCAGATTG AAAACCATGG AGTCCTTCAC CATCATACTC 
    TCGGCAACAC AGCTGTTTTA TCTGCTCGCC ATTCACGGCG GGAGGTAGAA 
    GAAGGTCAGG TTTTTCTGAT TAAAGTTGTG AAGGTGAAGA CACCTTTGTG 
    AGCATTATTG GGCATAGATC ATGGACTTTA CGAGCCTAAT TTGATTTCAC 
    CGGTTTGTGA GATTAAGTTC GACATGGATC AACCAGATCG AGGCGCTGTT 
    TGTGCTTGTC TACGAATACG TGTGTGTGTG TGTGTGTGTG TTTTATGCAG 
    TGTGTGACTA GCACTTCTTA GTAATTCGTG TGCCGAATAC TCGAACTCCT 
    GTGTGATTTG TTGATTATTT GGATGCGTTG ATTTATACTG TATTGATTTC 
    GCCGTGTCTG GTTAATCGAT TTGATTATGT GGACGTGATG GTTTACCTGT 
    TTG

    Gene models with high sequence identity

    1. AT1G29520.1 [+] show detail - AWPM-19-like family protein
      E-value: 8e-44; Score: 174.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G29520.1

    Model type
    Protein coding
    Short Description
    AWPM-19-like family protein
    Computational Description
    AWPM-19-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AWPM-19-like (InterPro:IPR008390); BEST Arabidopsis thaliana protein match is: AWPM-19-like family protein (TAIR:AT5G46530.1); Has 177 Blast hits to 177 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 177; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR