K37619

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K37619

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K37619

Determination of introduced cDNA(s)

  • J023113H16 - Rice Full-length cDNAs - Original: J023113H16

    full reading [+] show sequence

    Nucleotide sequence: J023113H16 - full reading 
    GACTCTAGAG AGCAGCAGGG AGAGCGAGAT GGGGTTGGGG TTGGGAGGCG 
    GCGGCGGCAT GGCGATGATC AACCGGAACC ACGTCGTGTC GTTCCTCGCC 
    GGCGCCGCGC TGCCGACGTT GCTGCTCTTC TTCCTCGCGT CCGACAGGGT 
    GAGCGAGAAG CTGGCGATCG TGTCGAGCTG GGGGAGTGGT GGATCATCGT 
    CGGCGGCGGC GGCGGATCAT GATCTCAGAG GCGCCGGTGG CGACGCTGCT 
    CCTCCTCCTG CTCAACAGGA GAAATTCCCG GGCTTGCCGG AGTTGCTGCC 
    GAAGGTGGCG ATGGAGGACA GGACGGTGAT CATCACGTCG GTGAACGAGG 
    CGTGGGCGGC GCCGGGGTCC CTCCTCGACC TCTACCGCGA CAGCTTCAAG 
    AACGGCGAGG GGATCGCCCA CCTCCTCGAC CATGTCCTCG TCGTCGCCGT 
    CGACCCCGCC GGCTTCCGCC GCTGCAAGGC CGTCCACCCC CACTGCTACC 
    TCCTCCACGT CAAGTCCATC AACCTCACCT CCGCCACCCG CTTCATGTCC 
    AGGGAGTACC TCGAGCTCGT CTGGACCAAG CTCTCCCTCC AGCAGCGCGT 
    CCTCGAGCTC GGCTACAACT TCCTCTTCAC GGACTGTGAC ATGGTGTTGT 
    TCCGTGACCC GTTCCGGCAC ATCGCGGTGT ACGCCGACAT GAGCACGTCG 
    TCGGACGACT ACTCCGCGGC GCGGGCGCCG CTGGACAACC CGCTCAACAC 
    GGGGCTCTAC TACGTGAAGG CGACGAGCCA GAGCGTGGAG ATGCTCCGCT 
    ACTGGCAGGC GGCGCGGCCG CGGTTCCCCG GCGCGCACGA CCAGGCGGTG 
    TTCGGCCACA TCAAGCACGA GCTCGTCGCC AAGCTGCGGG CCAGGATCGA 
    GCCGCTCGAC ACGCTCTACT TCGGCGGCTT CTGCGAGTAC CACGACGACC 
    TCGCCCGCGC CGTCACCATG CACGCCGACT GCTGCGTCGG CCTCGACACC 
    AAGGTGCACG ACCTCACCGA CATCGCCGCC GACTGGAAGA ACTACACGGG 
    CATGTCGCCG GAGGAGAGGA AGAAGGGGGG TTTCAAGTGG ACGTACCCCA 
    CCCGGTGCCG GAATTCGATT GGATGGCGTA AACCTGTTCA TCCCTAAATT 
    GTCAAGAGAA TTAATGGTTG AAGCTAATTT GATGTCACTG AAATTGCAGC 
    ATTCTGTTGT TGTATGAACT ATATGTCAAT CGACAATGAA CCTTAATTAT 
    CAATTGAATT AACACTAGGA CAATGTAAGA ACTGAGCTAT TCTGGAATAA 
    ATCTGAATAA ATGAGAGGTT GTTCAGATGA AGGG

    Gene models with high sequence identity

    1. AT1G14590.1 [+] show detail - Nucleotide-diphospho-sugar transferase family protein
      E-value: 1e-59; Score: 227.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther REGULATORY PROTEIN 5e-83
    HMMPanther PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 5e-83
    HMMPfam Nucleotid_trans 2.1e-56

    See the detailed result >

    AT1G14590.1

    Model type
    Protein coding
    Short Description
    Nucleotide-diphospho-sugar transferase family protein
    Computational Description
    Nucleotide-diphospho-sugar transferase family protein; CONTAINS InterPro DOMAIN/s: Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferase family protein (TAIR:AT2G02061.1); Has 314 Blast hits to 308 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 294; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR