K37945

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K37945

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K37945

Determination of introduced cDNA(s)

J033093E03 - Rice Full-length cDNAs - Original: J033093E03

full reading [+] show sequence

GTTCCAGGCT CGAGCACTCC GTTCTCCCGG GTCTCCGGTG CTGCTCCCGC 
CGCAGCCGGA CACCCGAACG CGAAGCTCCA ACTCTCCAAT GCTCCCCTCG 
TCTCGTTACC TCCTCGCCCC GGCCCCACTT CCCGCCATGG TGGTACGGCC 
ACCGCCGCCG CATCCACCGA GCCGCGGAAC TTCCCCTCTC GCTCGGCCAC 
CATTGTGCCG CGCCATGGCG CGGGCCGCCC CCTCGCTCTC TGCCGCGGCC 
TCGACGGCTG CCTCCTCCTC GACGACTCCT GCCAAGAAGA AGGTTCTCTT 
GCCCATCGCC ATGGGCACGG AGGAGATGGA GGCAGTCATC CTTGCCGGTG 
TACTCCGCCG AGCCGGCGCC GACGTGACGC TGGCATCCGT GGAGGACGGC 
CTCGAGGTGG AGGCCTCGCG TGGCTCCCAC ATCGTTGCTG ACAAGCGCAT 
TGCCGCTTGT GCAGACCAGG TGTTCGACCT CGTGGCTCTC CCGGGTGGAA 
TGCCTGGTTC AGTGCGGTTG AGAGACAGTG TGATCCTTCA GAGGATCACA 
GTTAGACAGG CTGAGGAAAA AAGATTGTAT GGTGCTATAT GTGCTGCACC 
AGCTGTTGTT CTCATGCCGT GGGGCCTCCA CAAGAGAAAA AAGATCACTT 
GTCACCCATC CTTTATAGAA GATCTCCCAA CATTCCGAAC TGTTGAATCA 
AATGTTCAGG TGTCTGGAGA GCTAACAACA AGCCGTGGAC CAGGGACAGC 
ATTTCAGTTT GCTTTATCAT TTGTAGAGCA GTTGTTTGGG CCTTGTAAAG 
CTGAAGATAT GGACAACACT TTGTTGACAA AGGTTGACGA TAATCTTGAA 
AGAAGTATTG AAGTCAACGA AATTGAGTGG TCTTCTGATC ACAATCCTCA 
TGTTCTCATT CCAATTGCAA ATGGTTCAGG AGAGATGGAG ATAATAATGT 
TGACGGATGT TTTACGGCGA GCAAATGTAA ATGTGGTGTT GGCATCAGTT 
GAAAAATCAA CAAGTATTGT CGGGTCCCAA AGGATGAGGA TTGTTGCTGA 
TAAATGCATT TCAGATGCTT CTGCCTTAGA ATATGATCTA ATTATCCTTC 
CTGGAGGACC TGCCGGAGCT GAGAGACTGC ACAAGTCCAG TGTTCTTAAG 
AAATTACTCA AGGAACAAAA GCAAACAGGC AGGATGTATG GTGGGATCTG 
TTCTTCTCCT GTGATCTTGC AGAAGCAGGG TTTACTCCAG GATAAAACAG 
TGACAGCTCA TCCTTCCATA GTCAATCAGC TCACGTGTGA AGTTATTGAT 
CGATCAAAGG TTGTGATTGA TGGAAATTTG ATTACCGGGA TGGGGCTTGG 
GACGGTCATT GATTTTTCGC TGGCTATTAT TAAAAAATTC TTTGGCCATG 
GACGAGCCAA AGGCGTGGCA AATGGCATGG TTTTTGAGTA TCCCAAGAGC 
TGAAACACCT AAAATATATC TGGCACTCTG TAATACGCAG ACGTGGGACA 
TTTAGTTGTG CTGCAAGTAT ATTGCAGTAG CTACGCTTGA GACAAAGGTC 
ACCGGTGCTC TTCGTCTTGC TGTTTTATGG GCCTTCAACT CTTCTTGAGA 
CAACAACATA TTCCTCTGTT GCGTCATTGG ACATCTGGAC GGAAATCATT 
CCACTATATT TGTTGGGATG GACCATTTAC ATTGAGAAGA TTCGGTGGAG 
GTCAATTCAT CTCGATATGA TCTGTTGGCA CATTACGACA CAGGTTGATT 
ACTAACTGGA TCTAAATATT GCAACTGATC AAGTGATGAT AACCTTCTGC 
TTGACGGATG CGCTTTTAGA AGAAACCCAT CATGTTCAGT GGGGCTTCCA 
AGGACCTGAA GCCCTTTTGA TGTTGCTCTT ATGCCCAGCT ATCCAATCTG 
ATAGTAGAGA CTTCCAGCCT GCGACAAACC AATTTAGCTT CGAAATTCAG 
ATCTTTTTTC AGCAATTTTG TTGCCTGAAT TCTGAAGTTA ACTGGCAATG 
TAGTACAATG GATTCCCTCA ATTTGCTCGA TAGTTGATCA GATAATTTGC 
TCGATAGTTG ATCAAATATT TGTTGCAACA AACATGCTC

Gene models with high sequence identity

AT4G34020.1 [+] show detail - Class I glutamine amidotransferase-like superfamily protein
E-value: 6e-117; Score: 418.00

InterPro Scan Digest

Program	Description	E-value
superfamily	Class I glutamine amidotransferase-like	6.3e-44
superfamily	Class I glutamine amidotransferase-like	1.8e-38
HMMPanther	THIJ-RELATED	5.3e-103
HMMPanther	THIJ/PFPI	5.3e-103
Gene3D	no description	1.5e-40
Gene3D	no description	1.6e-42
HMMTigr	DJ-1	4.4e-74
HMMTigr	DJ-1	1.5e-45
HMMPfam	ThiJ/PfpI	5.1e-27
HMMPfam	ThiJ/PfpI	2.7e-25

See the detailed result >

AT4G34020.1

Model type: Protein coding
Short Description: Class I glutamine amidotransferase-like superfamily protein
Computational Description: Class I glutamine amidotransferase-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: DJ-1 (InterPro:IPR006287), ThiJ/PfpI (InterPro:IPR002818); BEST Arabidopsis thaliana protein match is: Class I glutamine amidotransferase-like superfamily protein (TAIR:AT1G53280.1); Has 6311 Blast hits to 3877 proteins in 1442 species: Archae - 143; Bacteria - 5053; Metazoa - 521; Fungi - 51; Plants - 234; Viruses - 0; Other Eukaryotes - 309 (source: NCBI BLink).
Link: InterPro Scan - TAIR